Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01512 ATGGCACAACCAACAGTTTTGAAAGTTGTTCAAGTTTGTAGTGTGGCACCACTGCAGGGAACAACCCCTTCCTCTACTCCAACCTCTTTACCACTTACCTTCTTTGATCTTTTATGGTTAAGGTTTCCACCTGTTGAGTGTCTCTTCTTCTTTGAATTCCCACACTCTCCCACTTGTTTCTTTGATTCTGTTGTTCCCACTCTCAAACACTCTCTTTCACTCACTCTCCAACACTTCCTCCCTCTTGCTGGTAACATCACTTGGCCTCTTCACTCACCCTACCCCATCATCAATTATGTCCCTGGTGATGTTGTTTCTTTCACTGTGGCTGAGTCCAATGCCAATTTCAACCTTCTTTCTTCTGATCTCTGTGAAGCTGCTGAATTACATCCCTTGATACCCCACTTGACCACTTCTCATGAACAAGCATCTGTGATGACACTGCAACTCACTGTGTTTCCAAACTCTGGCTTTTGCATTGGAATGACCATACACCATGCAGCTTTAGATGGAAAGTCTACAATTTCATTTATGGAATCATGGCTTTATGCATGCTCTAAGCTTGGAGAATCACCATCTTTATCATTACCTGAACATCTAACACCTTCCTTTGAAAGATCAGTGATAAGAGACCCCTCAGGAATCACTAAAGCATGCTTGGATGCGTTGTTGGAGCATGCTGGACCAAATAATCGAAGTCTCAAGGTGAGGGAATCTAGGATTACCGTTCAGACCGGTAGGATCAAAGGTTTGTTTGAATTAACACCCTTACATATCCAAAAGCTTAAGCAATATGCACTTTCTAAGCTGAAATTGGAGGTTCAGCCATCAACATTTTCAGTTACATGTGCTTATGTGTGGGCATGCTTAGTCAAAGCACAACCACCAAAGGCCAATAGAGTAGTTTTAATGTTTCCTATTGACTGTAGATCCCGCTTGGACCCTCCAATTTCGCCCATGTATTTCGGAAATTGCCTTGTAGGCCAAAGGGTTGTGGCTGAGACGAAGAACTTAATAGAAAAAGATGGATTCATTATTGTTTTGGAGGGGATAAATGAAGCTTTGGATAGGGTGAAGAATGGTGTGCTAAGTGGATTAGAAACTCGAGTTTCAAATATGTACAAAGTAACGGAGGACCAAAAATACTCTATTGCTGGATCGCCACGGTTTGAGGTTTATAGTGTTGATTTTGGATGGGGAAGGCCAAAGAAGGTGGATATAACCTCGATAGACAAACCAGGAGCATTTTCTCTTTCAGAAAATAGGAATAACAATGGAGGAGTTGAGATTGGATTGGTGTTAAACAAGCAAGAGATGGAAGCTTTTTCTGCCCTTTTTGTTCAAGGACTTGAATCCTTTTGA 1362 0.4178 MAQPTVLKVVQVCSVAPLQGTTPSSTPTSLPLTFFDLLWLRFPPVECLFFFEFPHSPTCFFDSVVPTLKHSLSLTLQHFLPLAGNITWPLHSPYPIINYVPGDVVSFTVAESNANFNLLSSDLCEAAELHPLIPHLTTSHEQASVMTLQLTVFPNSGFCIGMTIHHAALDGKSTISFMESWLYACSKLGESPSLSLPEHLTPSFERSVIRDPSGITKACLDALLEHAGPNNRSLKVRESRITVQTGRIKGLFELTPLHIQKLKQYALSKLKLEVQPSTFSVTCAYVWACLVKAQPPKANRVVLMFPIDCRSRLDPPISPMYFGNCLVGQRVVAETKNLIEKDGFIIVLEGINEALDRVKNGVLSGLETRVSNMYKVTEDQKYSIAGSPRFEVYSVDFGWGRPKKVDITSIDKPGAFSLSENRNNNGGVEIGLVLNKQEMEAFSALFVQGLESF* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01512 453 PANTHER - 7 453 - -
Rops5g01512 453 Pfam Transferase family 26 443 - -
Rops5g01512 453 Gene3D - 6 233 IPR023213 -
Rops5g01512 453 Gene3D - 247 453 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01512 Rops-Chr5 31393866 31395227 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01512 50 448 Monolignol Biosynthesis Gene Families AT5G48930 24.766 1.12e-20 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01512 - - gmx:100800849 564.688