Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01510 ATGGCACAACCAACAGTTTTGAAAGTTGTTCAAGTCGGCAGTGTGGCACCACTGCAGGGAACAATCCCTTTAACTCCAACCTCTTTTCCACTTACCTTCTTTGACCTTTTATGGCTAAGATTCCCACCTGTTGAGTGTCTTTTCTTCTATGAATTTCCACACTCAACCACTTCTTTCCTTGATTCTGTTTTACCTATTTTCAAACACTCCATTTCACTAACTCTACAACACTACCTCCCTCTTGCTGGAAACATCACTTGGCCTCTTCATTCACCCCACCCCATCATCAACTATGTCCCTGGCGATGCTATCTCCCTCACTATAGCCGAATCCAATGCTGATTTCAATCGTCTCTGTTCTTCTGATATCTGTGAAGCTGCAGAACGACATCCCTTGATACCCCACTTGACCACTTCTCATGAACAAGCCTCTGTCATGGCACTGCAACTCACTGTGTTTCCAAACTCTGGCTTTTGCATTGGAATGGCCCTACACCATGCAGCTTTAGATGGAAAGTCGTTAACTTCATTTGTGGAATCATGGCTTTATGCTTGCTATAAGCTTGGTGAATCTCCATCTTTGTCATTACCTAAATATCTAACACCTTTATATGACAGATCAGTGATAAAAGATCCCACAGGAATCACTGAAGTGTACTTGGACACGTTGTTGGAGCATGGCGGACCAAATAATCGAAGTGTCAAGCTGTTAGAGTCTATTACTACAATTCAGACCGATGCGGTTAAAGGTTTGTTTGAATTAACACCCTCACATATCCAAAAGCTTAAGCAATATGCGCTTTCTAAGCTGAAATTGGAGGTTCAGCCATCAACATTTTCAGTTACATGTGCTTTTGTGTGGGCATGCTTAGTCAAAGCACAACAACCAAAGGCTAATGAAGTAGTTTTCGGATTTACTGTGGATTCTAGATCCCGCGTGGATCCTCCAGTTCTGCCTACCTATTTCGGAAATTGCACTGCTGGCCAAATGGTTGTGGTTGAGACAAAAAAATTAATAGAAAAAGATGGATTCATCGGTGCTTTGGAGGGGATAAATGAAGCTTTGAATAGGGTGAAGGATGGGGTGCTAAATGGAGCAGAAAATTTGATTTCAAAGACGCTGAATGCAGTGAACACAATATACAGTACTTTTGGATCGCCTCGTTTTAAGGTTTATAGTGTTGATTTTGGATGGGGAAGGCCAAAGAAGGTGGATATACCTTCGATAGACAAAACAGGAGCTTTTTCTCTTTGTGAAAGTAGGAATAGCAATGGAGGAGTTGAGATTGGATTGGTGTTACACAAGCCAGAGATGGATGTCTTTTCCACCCTTTTTGCTCAAGGACTTGAATCCTTTTGA 1359 0.4194 MAQPTVLKVVQVGSVAPLQGTIPLTPTSFPLTFFDLLWLRFPPVECLFFYEFPHSTTSFLDSVLPIFKHSISLTLQHYLPLAGNITWPLHSPHPIINYVPGDAISLTIAESNADFNRLCSSDICEAAERHPLIPHLTTSHEQASVMALQLTVFPNSGFCIGMALHHAALDGKSLTSFVESWLYACYKLGESPSLSLPKYLTPLYDRSVIKDPTGITEVYLDTLLEHGGPNNRSVKLLESITTIQTDAVKGLFELTPSHIQKLKQYALSKLKLEVQPSTFSVTCAFVWACLVKAQQPKANEVVFGFTVDSRSRVDPPVLPTYFGNCTAGQMVVVETKKLIEKDGFIGALEGINEALNRVKDGVLNGAENLISKTLNAVNTIYSTFGSPRFKVYSVDFGWGRPKKVDIPSIDKTGAFSLCESRNSNGGVEIGLVLHKPEMDVFSTLFAQGLESF* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01510 452 Gene3D - 244 452 IPR023213 -
Rops5g01510 452 SUPERFAMILY CoA-dependent acyltransferases 277 409 - -
Rops5g01510 452 Gene3D - 7 232 IPR023213 -
Rops5g01510 452 Pfam Transferase family 24 443 - -
Rops5g01510 452 PANTHER - 7 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01510 Rops-Chr5 31337499 31338857 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01510 35 441 Monolignol Biosynthesis Gene Families AT5G48930 23.272 2.32e-17 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01510 - - gmx:100785084 553.518