Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01507 ATGACGCAACCAGAACCTTTTAAAGTTGTTCAAGTTTGCAGTGTGGAACCGCTACAAGGAACAACCTCTTCCTCCACTCCAAACGCTCTACCACTTACCTTTTTTGATCTTTTATGGTTAAGGTTTCCACCTGTTGAGCGTCTCTTCTTCTATGAATTCCCTCACTCTCCCACTTGTTTCTTTGATTCTGTTGTTCCCACTCTCAAACACTCTCTTTCACTCACTCTCCAACACTTCCTCCCTCTTGCTGGTAACATCACTTGGCTCCTTGACTCACCCAATCCCATCATTAACTATGTCCCTGGTGATGGTGTCACCTTCACTGTAGCTGAATCCAACTCTGATTTCAACCTTCTATGTTCAAATCTCTGTGAAGCTTCCCTACGACATCCCTTGATACCCCACTTGACCATTTCCCATGAACAAGCTTCTGTCATGGCGCTGCAACTCACTGTGTTTCCAAACTCTGGCTTTTGCATTGGAATAACCACACACCATGCAGCTTTTGATGGAAAGTCTTCAACTTCATTTATGAAATCATGGGCCTATGCATGCTCTAGTCTTGGAGAATCACAATCTTTGTCATTCCCTGAACATCTGACACCTTTCTTTGACAGATCAGTGATAAGAGACCCCTCAGGAATCACTGAAGCGTACTTAGACACGTTGTTGAAGCAAGATGGGCCAAATAATCGAAGTCTCAAGGTGTGGGAGTTTCTTACTCCGATTCAAACCGATGCAGTTAAAGGTTTGTTTGAATTAACACCCTCACATGTCCAAAAGCTGAAACAATATGCTCACTCTAAGCTGAAAATGGAGGTTAAGTTATCAACATTTTCAGTTACATGTGCTTATGTGTTGGCATGCTTAGTCAAAGCACAACAACCAAATTCCAATAGAGTGGCTTTCGTATTTGGTGTGGATTGTAGATCCCGCTTGGAACCTCCAATTCTGCCCACATATTTCGGAAATTGCATTGTAGGGAAACTGGTTGTGACCGAGACAAAGAACTTAATAGAAAAAGATGGGTTTATTAGCGCTTTGGAAGAGATAAATGAAGCTTTGAACAGTGTGAAGGATGGAGTGCTAAATGGAGCAGAAGCTTGGGTTTCAAATATGAGTAATACACCAGAGGGAAAACTATACTCTACAGCTGGATCGCCACGGTTTGAGGTTTATAGTGTTGATTTTGGATGGGGAAGGCCAAAGAAGGTGGATATACCTTCGATTGACAAAACAGGATCAATTTCTCTTTCGGAAAGTTGGAATAACAATGGAGGAATTGAGATTGGGTTGGTGTTAAACAAGCCAGAGATGGAAGCTTTTTCTACCCTTTTTGTTCAAGGACTTGAATCCTCTTAA 1362 0.4207 MTQPEPFKVVQVCSVEPLQGTTSSSTPNALPLTFFDLLWLRFPPVERLFFYEFPHSPTCFFDSVVPTLKHSLSLTLQHFLPLAGNITWLLDSPNPIINYVPGDGVTFTVAESNSDFNLLCSNLCEASLRHPLIPHLTISHEQASVMALQLTVFPNSGFCIGITTHHAAFDGKSSTSFMKSWAYACSSLGESQSLSFPEHLTPFFDRSVIRDPSGITEAYLDTLLKQDGPNNRSLKVWEFLTPIQTDAVKGLFELTPSHVQKLKQYAHSKLKMEVKLSTFSVTCAYVLACLVKAQQPNSNRVAFVFGVDCRSRLEPPILPTYFGNCIVGKLVVTETKNLIEKDGFISALEEINEALNSVKDGVLNGAEAWVSNMSNTPEGKLYSTAGSPRFEVYSVDFGWGRPKKVDIPSIDKTGSISLSESWNNNGGIEIGLVLNKPEMEAFSTLFVQGLESS* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01507 453 SUPERFAMILY CoA-dependent acyltransferases 250 451 - -
Rops5g01507 453 PANTHER - 8 452 - -
Rops5g01507 453 Pfam Transferase family 24 443 - -
Rops5g01507 453 Gene3D - 244 452 IPR023213 -
Rops5g01507 453 Gene3D - 7 233 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01507 Rops-Chr5 31291806 31293543 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01507 48 448 Monolignol Biosynthesis Gene Families AT5G48930 27.553 4.90e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01507 - - gmx:100800849 599.742