Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01505 ATGACACAACCTGCAGCAAATTTGAAAGTTGTTCAAGTTAGCAGTGTGGCACCTCTGCAAGGAACAATCCCTTCCTTCTCTCCAACCTCTTTACCACTTACCTTCTTTGATCTTTTATGGTTAAGGTTTCCACCTGTTGAGTGTCTCTTTTTCTTTGAATTCCCACACTCTCCCACTTGTTTCTTTGATTCTGTTGTTCCCACTCTTAAGCACTCTCTTTCACTCACTCTCCAACACTTCCTCCCTCTTGCTGGTAACATCACTTGGCCTCTTCACTCCTCTAAACCCATCATCAACTATGTCCCTGGTGATGCTGTCCCCTTCACTGTTGCTGAATCCAATGCTGATTTCAACCATCTATGTTCAAATCTCTGTGAAGCTGCACAACGATATCCCTTGATGCCCCACTTTTCCATTTCTCATGAACAAGCATCTGTGATGGCACTGCAACTAACTGTGTTTCCAAACTCTGGCTTTTGCATAGGAATAACCACACACCATGCAGCTTTAGATGGAAATTCTGCAATTTCATTTATGAAATCATGGGCCTATGCATGCTCTAAGCTTGGAGAATCACCATCTTTATCATTACCTGAAAATCTGACACCTTTCTATGACAGATCAGTGATAAAAGATCCCACAGGAATCACTGAAGCATACTTGGACGCGTTGTTGAAGCATGGTGGACCAAATAATCGAAGTCTCAAGGTGTGGGAGTCTGTTACTACACTACAGACCGACGCGGTTAAAGGTTTGTTTGAATTAACACCCTCACATATCCAAAAGCTTAAGCAATATGCACTCTCTAAGCTGAAAATGAAGGTTCAATTATCAACATTTTCAGTTACATGTGCTTATGTGTTGGCATGCTTAGTCAAAGCAGAAAAACCAAAGGCCAATAGAGTAGTTTTCGCATTTAGTGTGGATTCTAGATCCCGCTTGGACCCTCCAATTCTGCCCACGTATTTCGGAAATTGCGTTGCTTTCCAAAATGTTGAGGCTGAGACAAACAACTTAGTAGAAAAAGATGGATTCATCAGTGTTTTGGAGGAGATAAATGAAGCTATGAAGAGGGTGAAGGATGGAGTGCTAAATGGAGCAGAAACTTGGGTTTCAGAAACGCAGAATGCAACTGAGGACAGAAAATATGCTACTGCTGGATCTCCACGGTTTGAGGTTTATAGTATTGATTTTGGATGGGGAAAGCCAAAGATGGTGGATATAACTTCAATAGATAAAACAGGAGCATTTTCCCTTTGGGATAGTAGGAATAACAATGGAGGAATTGAGATTGGATTAGTGTTAAACAAGCCAGAGATGGAAGCCTTCTCTGCCCTTTTTGTTCAAGGACTTGAATCCTCTTAA 1365 0.4154 MTQPAANLKVVQVSSVAPLQGTIPSFSPTSLPLTFFDLLWLRFPPVECLFFFEFPHSPTCFFDSVVPTLKHSLSLTLQHFLPLAGNITWPLHSSKPIINYVPGDAVPFTVAESNADFNHLCSNLCEAAQRYPLMPHFSISHEQASVMALQLTVFPNSGFCIGITTHHAALDGNSAISFMKSWAYACSKLGESPSLSLPENLTPFYDRSVIKDPTGITEAYLDALLKHGGPNNRSLKVWESVTTLQTDAVKGLFELTPSHIQKLKQYALSKLKMKVQLSTFSVTCAYVLACLVKAEKPKANRVVFAFSVDSRSRLDPPILPTYFGNCVAFQNVEAETNNLVEKDGFISVLEEINEAMKRVKDGVLNGAETWVSETQNATEDRKYATAGSPRFEVYSIDFGWGKPKMVDITSIDKTGAFSLWDSRNNNGGIEIGLVLNKPEMEAFSALFVQGLESS* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01505 454 Gene3D - 8 233 IPR023213 -
Rops5g01505 454 SUPERFAMILY CoA-dependent acyltransferases 244 453 - -
Rops5g01505 454 PANTHER - 8 453 - -
Rops5g01505 454 Pfam Transferase family 29 444 - -
Rops5g01505 454 Gene3D - 245 453 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01505 Rops-Chr5 31256693 31258312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01505 51 449 Monolignol Biosynthesis Gene Families AT5G48930 25.416 1.35e-20 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01505 - - gmx:100800849 574.318