Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01487 ATGATGTACCAAAGATTAAACCAACCCCAAAAGGATGTATTGGCTTACGAGAAGGCAGAAAGATCTCAAGGTCCTAGTGAACTGCTTTCATGCGTTGGAAATGAGATGGTTTCTATAATTAGAGATGGTGAACATGTGTTAGGTGTAGCTCCCGAGAGTTTGGTTGGTTTGGTACTTAAGAACGCATATGCTCACAATCCTGCTCACTTGGAAGTTGCCAGGCGTGACCATGCTGCCCTGAGGCGCATGGTTTCCACACTGCCTCGGTTTGCTAAGGCTGGTGAGGTCAACACTGAAGCTGACTCTCTTGCGGCTGAACTTCGAGCGGATGAGAGTCTACAGAATGAGAATGGTTGGAGTGCTCTCAAAGTTGGTGGCATAAACTATGAGGTACCATCAGGATGCAGAGATGGTCGTATCTCTATTGGTGATGAAGTGCCACAGAATCTTCCTGCACCAACCCTGAATGGTGATGGACTTGTTAGCAACTTTGCAAGAAAAGGGTTGTCAGCAGATGAAGTGGTGACCCTTTCAAGAGCTCATTCAATAGGTGTATCACATTGTTCCTCTTTCTCAAACAGACTATACTCTTTCAATGTCACACATACTCAAGACCCTTCCATGGACCATTCGTTTGCTACATCCTTGAAAGAAAAGTGTCCATCACCACCGAGCAACAATGACCCAACAGTGGATCTGGATGTTGCCACCCCTATTCGTTTGGACAACAATTATTATGAGGGACTCATCAAACATCGTGGCTTGTTGACCTCTGATCAGACCTTGTTGACCACCCAATCAACACAGCAATGGTTTGAGGCCCTTTGCATGTCCTTTCTATGGCTCATACTCCATTGCACCCTTTGGTAA 870 0.4575 MMYQRLNQPQKDVLAYEKAERSQGPSELLSCVGNEMVSIIRDGEHVLGVAPESLVGLVLKNAYAHNPAHLEVARRDHAALRRMVSTLPRFAKAGEVNTEADSLAAELRADESLQNENGWSALKVGGINYEVPSGCRDGRISIGDEVPQNLPAPTLNGDGLVSNFARKGLSADEVVTLSRAHSIGVSHCSSFSNRLYSFNVTHTQDPSMDHSFATSLKEKCPSPPSNNDPTVDLDVATPIRLDNNYYEGLIKHRGLLTSDQTLLTTQSTQQWFEALCMSFLWLILHCTLW* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01487 289 PRINTS Plant peroxidase signature 248 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01487 289 PRINTS Plant peroxidase signature 232 247 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01487 289 PRINTS Plant peroxidase signature 172 184 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01487 289 PRINTS Plant peroxidase signature 125 140 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01487 289 FunFam Peroxidase 151 279 - -
Rops5g01487 289 Gene3D - 123 150 - -
Rops5g01487 289 ProSiteProfiles Plant heme peroxidase family profile. 42 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g01487 289 PANTHER PEROXIDASE 25-RELATED 113 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01487 289 SUPERFAMILY Heme-dependent peroxidases 120 273 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops5g01487 289 Gene3D Peroxidase, domain 2 151 273 - -
Rops5g01487 289 Pfam Peroxidase 124 275 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g01487 289 PRINTS Haem peroxidase superfamily signature 173 188 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g01487 289 PRINTS Haem peroxidase superfamily signature 234 249 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g01487 289 PRINTS Haem peroxidase superfamily signature 125 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01487 Rops-Chr5 30740517 30741663 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01487 125 268 Peroxidase AT1G05260 46.897 5.86e-34 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01487 K00430 - gmx:100815350 219.935