Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01480 ATGTCTAAAAAGGTTGTGACATCCATGAAGGATGAAAATTCAGAATTGCAGAAGCAGATTGGTTGCATCAGTGGATTTTTTCAGCTGTTTGACCGCCAATGGTTCCTCACCGGGCAACGCAGTAGCAGCCACTGTCAGAACTTACCAACTCAAGATGGAACCAGTAATCACATCCAAGAGCTGAATAATACAAGACAAAAGGCAAGGGCAAAGAATATGAAGGCTTCAAGAGAGAATCCACAATTCTCCACAGAATCATCAGGAACTTCACTGTCTTCATCATCATGTTCATCTAGCATGTCATCACTTGAGTTTAACAGAACAATTCAGATAGAACCACCATCAATAAATCAAGCCAAAATCCAAGAAAACTCCAATTCAGGAGCAGCAATGAAGCAACTTGGCAACCAAGGCAATCAGTCCCTTGATTTCTATGATATTGTCAAAGACTCAATGCATAGAGATGTTCAAGGATTATCAGTGAAAACTGTGGCTAAAAAGGAAAAGAAGGGTCCTATCTTGAAATACATTGACTCTCCCAGGCCTTTGCAGGCCTCAAAATATGTCAATACAGGAGTTATGGTTGCTTGGGATTCACCAAGACTCTCCTGTGATGGGAGGGATATGCATGATACATTCAAATCTGCTACAAAGCACAAGGAACTCCCAAGGTTTTCCTTGGACAGCAGAGAAAGATCTATCAAAAGTTTCAATGAAGGAACAAAATCTAGCAACCTGTTGAAGGGTCCACAAAAAGGGTATGGAGGCTCTAGCACAATGCTTAATAAGCAGCTGCAAGAACCTGAAACTTCTAAAAGACCATCATCCAGTGTTGTAGCAAAGTTAATGGGACTAGAAGCCTTCCCAGATTGGAGTCAAACTTGTGATACTCCACCAGGGAACTCTAGTTTTACTACCAACAAAAATGAGACCTTTGCAGGATCTTGCATGAGTGATGGATACAAGCACCACCAAAGTTCAGCATCTCCAAGGACAAGCAAAGGGTCTACCTTGCTTCAGTCTAGGAGGGATGCTTCAATCACAAATGTGACACCATATTCAAGATTTTCCCTGGAACCAACTCCATGGAAGCAACCTGATGCAAGTCAAGGTTCACAATTACAAGCTTCCAAGAGAAATGAATCTTCAACAAAACCATCAAACTCATCCCTATCTGTATATGGGGAAATTGAGAAAAGGATGGCGGATCTAGAGTTCAAAAAATCTGGAAAGGATCTCAGAGCCCTTAAACAGATTCTTGAAGCTATGCAGAGATATAAAGAATCATTAGATATTACAAGAGATCAGGCTTCAAATTCTCCATCTGAAAATAGTAGTCTCAGTGAAAGCTCAAAAGTACAAAGCCCAAGATTAAGGCAGATACAGAAGGACTCAACATCTGCCACTGTTGAGATGTCAAATTCACCACAGGGCAGTAAATCTCCAATTGTCATCATCAAAACAGCAAAAGTTACAAGAAAAACCAATACTTCTGCTTCCACAGAAATGTCAGTTCATGGCAAATCAGCAAAAGGTAGTCCAGCAATCAGACATGTCAAGGATCCTATTAGTCAACCCTTTCATTCAGTGGATAAGAGTAGCAATAAGATGAGAACTTCAAAATTGATGCAATCCGCAAAAGTTCCTCAAGTCATCAATGGAGAAAACAGCACCAACTCCAGCAATACATCAGAGACAAGGAGCCCAAGACTACAAAAGAAGTTTGGTTTGGAGAGGCGTTCTCCACCAACTAGCCCATCATCAGATTCCAGCAGTAACAGAAGACAACACAATAGGCAATCAAAGGATTTGTCTTCCCCAAGCACAACACCAAGACAAAAATTCTCTACTTTGAAGGAAAGAAATGAATGTTTCAGTGAGATCAGCTATCAAAGGAGGGATTTTAAGCATGAAGTTGATGTTATTTTGCCAGATTTTGACAGCAAGAGAAGCATTGATTCACAAAGTGATATAGAAGTCATTCACATTGATCATTCTGAAAAGATCAATAGCAACTCCATCCAGCTAAAAGGCCTGAATCCAAATGATGCAGAGAAAGAGATGAGCAAGGAAAGCTTTATGGCAAAAACAATAGTTACTGCTGAACAACCTAGTCCTGTGTCTGTTCTAGATGCTGAATTCTATAGAGAGGAACCACCTTCTCCAGTTAAAAGGAAATCAAACATCTCAAAAGATTTAGATGAAGCTTTGAACACTTGCGATATTAGTGAGGAGAATTCAGAAGATCTTCCTCTTTCATCCAACACCACAAAAGCCAACTTCAGCAATGGAACCAGTGATATTGACTTGAAAACTCATAATTTGGTTCAAATTCTTCAACAAATTCACTACAGTGATGAGAGATTCACCAATTTCAGTGACAATAAAGATCCTGACCACAAATATATATCAGAATTACTGTTAGCATCAGGACTGCTCACTAGTCCCATCTCTAGCCAGGCATTTCATCCATCAGGTTATCCAATTAACCCGAAGTTGTTCCTCACACTAGAGCAAATCAACACAAACAAGATGCATTACAACATTGAACACAGTTCCATGAAGATTACCAAGATGAATTATCATGAGAAAATGCAAAGAAAGCTCATATTTGATGTGGTTAATGACATGCTAGTTCAAAAGCTAATATTGGAGAGTTCTTCCACTTTGTGGTGCCAGCCAAATCAACCAGCAGGCAAAAAACTAAAAGGACAGCAGCTTTTGGATGAACTTTGCACAGAAATTGATCAGTTACAATATAAAAATAGGAATGTCAGCCTGGCAAATGAGGATGAGAATTTGACAAGTCTCTTGTGGGAAGATTTGAGGCATCACCCCACAATTTATACAGAATGCTCCAGTGAGATACCAAATATGGTGTTGGATATTGAAAGGTTGATCTTCAAAGATTTGATAACTGAAGTTGTGAGAGGTGAAGTACCTAACCATTCTGGTAAGCATTGCAGGAAACTGCAGTTACCAAGCAGGAATTCCAGCTAA 3000 0.397 MSKKVVTSMKDENSELQKQIGCISGFFQLFDRQWFLTGQRSSSHCQNLPTQDGTSNHIQELNNTRQKARAKNMKASRENPQFSTESSGTSLSSSSCSSSMSSLEFNRTIQIEPPSINQAKIQENSNSGAAMKQLGNQGNQSLDFYDIVKDSMHRDVQGLSVKTVAKKEKKGPILKYIDSPRPLQASKYVNTGVMVAWDSPRLSCDGRDMHDTFKSATKHKELPRFSLDSRERSIKSFNEGTKSSNLLKGPQKGYGGSSTMLNKQLQEPETSKRPSSSVVAKLMGLEAFPDWSQTCDTPPGNSSFTTNKNETFAGSCMSDGYKHHQSSASPRTSKGSTLLQSRRDASITNVTPYSRFSLEPTPWKQPDASQGSQLQASKRNESSTKPSNSSLSVYGEIEKRMADLEFKKSGKDLRALKQILEAMQRYKESLDITRDQASNSPSENSSLSESSKVQSPRLRQIQKDSTSATVEMSNSPQGSKSPIVIIKTAKVTRKTNTSASTEMSVHGKSAKGSPAIRHVKDPISQPFHSVDKSSNKMRTSKLMQSAKVPQVINGENSTNSSNTSETRSPRLQKKFGLERRSPPTSPSSDSSSNRRQHNRQSKDLSSPSTTPRQKFSTLKERNECFSEISYQRRDFKHEVDVILPDFDSKRSIDSQSDIEVIHIDHSEKINSNSIQLKGLNPNDAEKEMSKESFMAKTIVTAEQPSPVSVLDAEFYREEPPSPVKRKSNISKDLDEALNTCDISEENSEDLPLSSNTTKANFSNGTSDIDLKTHNLVQILQQIHYSDERFTNFSDNKDPDHKYISELLLASGLLTSPISSQAFHPSGYPINPKLFLTLEQINTNKMHYNIEHSSMKITKMNYHEKMQRKLIFDVVNDMLVQKLILESSSTLWCQPNQPAGKKLKGQQLLDELCTEIDQLQYKNRNVSLANEDENLTSLLWEDLRHHPTIYTECSSEIPNMVLDIERLIFKDLITEVVRGEVPNHSGKHCRKLQLPSRNSS* 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01480 999 MobiDBLite consensus disorder prediction 237 277 - -
Rops5g01480 999 MobiDBLite consensus disorder prediction 527 570 - -
Rops5g01480 999 MobiDBLite consensus disorder prediction 319 392 - -
Rops5g01480 999 MobiDBLite consensus disorder prediction 46 95 - -
Rops5g01480 999 MobiDBLite consensus disorder prediction 238 277 - -
Rops5g01480 999 PANTHER LONGIFOLIA PROTEIN 1 989 IPR033334 GO:0051513
Rops5g01480 999 MobiDBLite consensus disorder prediction 433 482 - -
Rops5g01480 999 MobiDBLite consensus disorder prediction 46 69 - -
Rops5g01480 999 MobiDBLite consensus disorder prediction 490 507 - -
Rops5g01480 999 Pfam Domain of unknown function (DUF4378) 799 974 IPR025486 -
Rops5g01480 999 MobiDBLite consensus disorder prediction 431 618 - -
Rops5g01480 999 MobiDBLite consensus disorder prediction 76 95 - -
Rops5g01480 999 Coils Coil 416 436 - -
Rops5g01480 999 Coils Coil 58 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01480 Rops-Chr5 30629652 30635060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01480 128 993 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 32.915 3.83e-93 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01480 - - aprc:113867263 1380.54