Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01478 ATGGAGCAATCAAGAGCTGTGAAAATTCTCCAAGTATGCCAAGTGGCACCTGAAAATGAGGGAACAAAAACCACTTCCTCCTCCCCAATGTCACTACCATTCACCTTCTTTGATTTGCTATGGCTAAGATCTCCACCAGTGGAACGTCTTTTCTTCTATGAATTCCCCAACAAAACCATTTCATTCTTTGATTCCATTCTTCCAAATCTCAAACGCTCCCTTTCACTCACTCTCCAACACTTCCTCCCTCTTGCTGGTCACATCACTTGGCCACTTCACTCAACCTACCCCATCATTAACTATTTCCCTGGTGAATCTGTTTCCTTCACAGTAGCTGAATCCAATGCCAATTTCAACCTTCTTTGTTCCAATATATGTGAAGCTGTGGAATTTCAACCCTTGATACCCCACTTACCTACTTCCCATGAACAAGCATCAGTTTTAGCCTTGCAAGTTACTCTTTTTCCAGGCTTTGGTTTTTGCATTGGAATAGCTACACACCATGCAGCTATGGATGGAAAGTCTTCAACTTTGTTTATGAAAGCATGGGCCTGTGCTTGCTCTAAGCTTGGTGAATCAGCATTCTCATCATTACCTGAAAATCTAACACCATTCTATGACAGATCAATGATAAGAGACTCTTCAGGAATTGGTGCAGTGTATGTGAATGGTTGGTTGAACATTGGTGGACCAAACAATAGAAGCATGAAGGTGTGGGATTTTGGTGGCACAATATCCAATGAGGCAACTAGAGGTTCATTTGAGTTGACTTCTTCAACCATCCAAAAGCTTAAGAAACATGCACAATCTAAGCTCAAGATGAATGGTCATTTATCAACATATTCAGTTACTTGTGCTTATGTGTTGCAATGTTTAGTCAAAGTAGAACAACCAAAGGTCAATGGAGTAGCTTTTCTATTCAGTGTGGATTGTAGATCTCGCTTGGACCCTCCAGTTCCAAACACATACTTTGGAAATTGCATTGTTGGCCATAAGGTTATGGATGAGACAAAAAAGTTACTAGGAAGTGAAGGTTTCATCAATGCTTGTGAGGGGATGCATGAAGCTTTGAATAGATTAGAGGATAGAGTGCTAAGTGGAGCCACAACTTTGTCTACAATGATGCAAATTGCAAGGGATAATAAAATCATCACCACTGCTGGGTCACCAAGGTTTGAGGTTTATAGTATTGATTTTGGATGGGGAAGGCCAAAGAAAGTGGATATGACTTCTATAGGAAAAACAAGTGCATTTTCTCTTTCAGAAAGTAGGGAAAACATTGGAGGAATTGAGATTGGTTTGGTGTTGAACAAAGGTGAAATGGAAGCTTTTTCTGCTTATTTTGTTCAAGGACTTGAATCTCTTTAA 1368 0.4013 MEQSRAVKILQVCQVAPENEGTKTTSSSPMSLPFTFFDLLWLRSPPVERLFFYEFPNKTISFFDSILPNLKRSLSLTLQHFLPLAGHITWPLHSTYPIINYFPGESVSFTVAESNANFNLLCSNICEAVEFQPLIPHLPTSHEQASVLALQVTLFPGFGFCIGIATHHAAMDGKSSTLFMKAWACACSKLGESAFSSLPENLTPFYDRSMIRDSSGIGAVYVNGWLNIGGPNNRSMKVWDFGGTISNEATRGSFELTSSTIQKLKKHAQSKLKMNGHLSTYSVTCAYVLQCLVKVEQPKVNGVAFLFSVDCRSRLDPPVPNTYFGNCIVGHKVMDETKKLLGSEGFINACEGMHEALNRLEDRVLSGATTLSTMMQIARDNKIITTAGSPRFEVYSIDFGWGRPKKVDMTSIGKTSAFSLSESRENIGGIEIGLVLNKGEMEAFSAYFVQGLESL* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01478 455 PANTHER - 7 454 - -
Rops5g01478 455 Gene3D - 246 455 IPR023213 -
Rops5g01478 455 SUPERFAMILY CoA-dependent acyltransferases 277 453 - -
Rops5g01478 455 Gene3D - 6 236 IPR023213 -
Rops5g01478 455 Pfam Transferase family 31 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01478 Rops-Chr5 30588828 30590195 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01478 50 450 Monolignol Biosynthesis Gene Families AT5G48930 25.542 1.69e-20 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01478 - - gmx:100785084 688.337