Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01477 ATGGAGCAATCAAGAGCTGTGAAAATTCTCAAAGTATGCCAAGTGGCACCTGCACATGAGGGAACAACAACCACTTCCTCCTCCCCAATGTCACTACCATTCACCTTCTTTGATTTGCTATGGCTAAGAACTCCACCAGTGGAACGTCTTTTCTTCTATGAGTTCCCCAACAAAACCATTTCATTCTTTGATTCCATTCTTCCAAATCTCAAACACTCCCTTTCACTCACTCTCCAACACTTCCTCCCTCTTACTGGTAACATCACTTGGCCACTTGACTCTACCTACCCCATCATCAACTATGTCCCTGGTGATGCTGTTTCCTTCACAGTAGCTGAATCCAATGCCAATTTCAACCTTCTTTGTTCCAATATATGTGAAGCTGTGGAATTTCAACCCTTGATACCCCACTTACCTACTTCCCATGAACAAGCATCAGTTTTAGCCTTGCAAGTTACTCTTTTTCCAGTCTTTGGCTTTTGCATTGGAATAGCTACACACCATGCAGCTATGGATGGAAAGTCTTCAACTTTGTTTATGAAAGCATGGGCCTATGCATGCTCTAAGCTTGGTGAATCAGCATTCTCATCATTACCTGAAACTCTAACACCATTCTATGACAGATCAATGATAAAGGACTCCACAGGAATTGGTGAAGCATGTGTGAACAGTTCGTTGAACATTGGTGGACCAAACAATAGAAGCATGAAGCTGTGTGATTTTGGTGGCACAATATCCAATGAGGCAACTAGAGTCAAAGTAGAACAACCAAAGGTCAATGGAGTAGCTTTTCTATTCAGTGTGGATTGTAGATCTCGCTTGGACCCTCCAGTTCCAAACACATACTTTGGAAATTGCGTTGTTGGCCATAAAGTTATGGATGAGACAAAAAAGTTATTAGGAAGTGAAGGTTTCATCAATGCTTGTGAGGGGATGCATGAAGCTTTGAATAGATTAGAGGATGGAGTGCTAAGTGGAGCCACAACTTTGTCTACAATGATGCAAATTGCAAGGGATAATAAAATCATCACCACTGCTGGGTCACCAAGGTTTGAGGTTTATAGTATTGATTTTGGATGGGGAAGGCCAAAGAAGGTGGATATGACTTCTATAGGAAAAACACGTGCGTTTTCTCTTTCAGAAAGTAGGGATAACATTGGAGGAATTGAGATTGGTTTGGTGTTGAACAAAGGTGAAATGGAAGCTTTCTCTGCTTTTTTTGTTCAAGGACTTGAATCTCTTTAA 1245 0.4129 MEQSRAVKILKVCQVAPAHEGTTTTSSSPMSLPFTFFDLLWLRTPPVERLFFYEFPNKTISFFDSILPNLKHSLSLTLQHFLPLTGNITWPLDSTYPIINYVPGDAVSFTVAESNANFNLLCSNICEAVEFQPLIPHLPTSHEQASVLALQVTLFPVFGFCIGIATHHAAMDGKSSTLFMKAWAYACSKLGESAFSSLPETLTPFYDRSMIKDSTGIGEACVNSSLNIGGPNNRSMKLCDFGGTISNEATRVKVEQPKVNGVAFLFSVDCRSRLDPPVPNTYFGNCVVGHKVMDETKKLLGSEGFINACEGMHEALNRLEDGVLSGATTLSTMMQIARDNKIITTAGSPRFEVYSIDFGWGRPKKVDMTSIGKTRAFSLSESRDNIGGIEIGLVLNKGEMEAFSAFFVQGLESL* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01477 414 Gene3D - 6 235 IPR023213 -
Rops5g01477 414 Gene3D - 244 414 IPR023213 -
Rops5g01477 414 PANTHER - 7 221 - -
Rops5g01477 414 Pfam Transferase family 31 186 - -
Rops5g01477 414 Pfam Transferase family 257 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01477 Rops-Chr5 30580173 30581685 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01477 50 409 Monolignol Biosynthesis Gene Families AT5G48930 23.716 2.29e-16 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01477 - - gmx:100785084 596.275