Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01476 ATGGCTCAATCATCATCATTGAAAGTTCACCAAGTTCTTATGGTGGCACCACCACATGAAACCACCCCAATTTCTCTTCCCTTCACCTTCTATGATTCTCTATGGCTTAGACTCCCTCCTGTTGAACGTCTTTTCTTCTATGAACTCCCAAACTCAACAACCACTTCTTTCTTTGATTCCATTCTTCCCAATCTCAAACACTCCCTTTCACTCACACTCCAACACTTTCTCCCTCTTGTTGGTAACATCACTTGGCCACTTGTCTCACCCCAACCCATCATCAACTATGTCCCTGGTGATGTTGTTCCCTTAACCGTAGCTGAATCCGTAGCTGATTTCAACCATCTTTGTTCAAATCTTTGTGAAGTTGAACAACGACACCTTTTAATACCTCGCTTGAAAATTTCCCATGAACAAGCTTCTGTTTTGGCACTTCAAGTCACTTTTTTTCCAAACTTTGGATTCTCTGTTGGGATCACCACACACCATGCTGCTGTTGATGGAAGATCTTCAACATTGTTTTTGAAAGCATGGGCCTATCTTTGTTCTAATCTCTTAGATCATCATCATCACTCACCACCCACTTTATCATTACCTGAAAATTTAACACCTTTCTTTGATAGATCAGTGATAAGAGACCCTTCAGGGATAGGTGAAAATCATTTGAAGGGATGGTTGAACTTTGGTGGAGAAACTAATAATCGAAGTTTGAAGGTAATGAAATCTTTTAGTCCACCACAGAGTGATGCAGTTAAAGGTTTGTTTGAATTGACACCTTCACATATCCAAAAGCTAAAGCAGCATGCACAATCTAAGATGAAAAATAAGGTTCGCTTATCAACATTTTCAGTTACATGTGCTTATTTATTAGCATGTATGGTTAAAGTAGACAAACCAAAATCCAATAGGGTAGCTTTTATATTCACTGTGGATTGTAGATCCCGTTTGGACCCTCCAATTAAGCCAACATATTTTGGAAATTGCATTGTGTCCCAATTGGTTGTGGCTGAGACAGAGACACTGTTAAAAGATGATGGATTCATCAATGCCCTTGAAGGGATAACTGAAGTGTTGATTAGCTTGGAAGATGGGGTGCTAAATGGAGTAGAAAATTGGACTTCAAAGATACAACCTGTGATTAATGACAGGTTCTTCTCCACTGCAGGGTCACCAAGGTTTGAGGTTTATGGTATTGATTTTGGATGGGGAAGGCCTAAAATGGTGGATGTGACTTCCATAGATAAAACAGGAGCATTTTCTCTTGCAGAAAGTAGGAACAATGATGGAGGAATTGAGATTGGTTTGGCACTGAATAAGTGTCAAATGGAGGGTTTTGCTGAACATTTTGCTCAAGGACTTGAATTGAAACTTTAA 1374 0.3952 MAQSSSLKVHQVLMVAPPHETTPISLPFTFYDSLWLRLPPVERLFFYELPNSTTTSFFDSILPNLKHSLSLTLQHFLPLVGNITWPLVSPQPIINYVPGDVVPLTVAESVADFNHLCSNLCEVEQRHLLIPRLKISHEQASVLALQVTFFPNFGFSVGITTHHAAVDGRSSTLFLKAWAYLCSNLLDHHHHSPPTLSLPENLTPFFDRSVIRDPSGIGENHLKGWLNFGGETNNRSLKVMKSFSPPQSDAVKGLFELTPSHIQKLKQHAQSKMKNKVRLSTFSVTCAYLLACMVKVDKPKSNRVAFIFTVDCRSRLDPPIKPTYFGNCIVSQLVVAETETLLKDDGFINALEGITEVLISLEDGVLNGVENWTSKIQPVINDRFFSTAGSPRFEVYGIDFGWGRPKMVDVTSIDKTGAFSLAESRNNDGGIEIGLALNKCQMEGFAEHFAQGLELKL* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01476 457 Gene3D - 247 456 IPR023213 -
Rops5g01476 457 SUPERFAMILY CoA-dependent acyltransferases 255 454 - -
Rops5g01476 457 Pfam Transferase family 13 449 - -
Rops5g01476 457 Gene3D - 7 237 IPR023213 -
Rops5g01476 457 PANTHER - 7 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01476 Rops-Chr5 30551550 30552923 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01476 44 447 Monolignol Biosynthesis Gene Families AT5G48930 26.540 4.76e-23 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01476 - - gmx:100785084 569.311