Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01474 ATGTTTTCTTCTTCTTCTTCTTCTAATTCTAGTTCTTATTGCAATTCAGTGATCATCAAATGGAGTTCCTTTACCCAATTTCACTTCCTTTTTTATATATTTCTTCTCTTTCTGTCGTTTCCTCAAAACGACGCCCTTTCACCCGATTCCGACAAATCGGTGCTCCTTCGCCTGAAAAACTCGCTCTCCGACCCCTCCGGTCTTCTCTCCACGTGGACCACCGTCTCCGGAGGCGGTGACGGTAACTCCGGCGAACATTGTTCCTGGTCCGGCGTCCACTGCGACTCCACCAAACGCGTCGTCGCTCTCAACATCACCGGCGCCGGCGACCGGAACCCTCACCCGTGCTCCGATTTCACTCAATTTCCGCTTTATGGGTTCGGAATTAGAAGAAGCTGTGAGGGTTATAAGGGTTCTTTGTTCGGAAAGGTTCCACCTTTGATCAGTGAGTTAACCGAGCTAAGGGTTTTGTCCCTCCCCTTCAATGGGTTGGAGGGTGAAATCCCAAATGAAATTTGGGGTATGGAGAAACTTGAGGCTCTTGATCTAGAGGGAAATTTGATAAGTGGGTATCTTCCATTTCGTGTTCAGGGTTTGAGGAATTTGAGGGTTTTGAATCTGGGATTTAATAGAATTGTTGGGGAAATACCAGGTTCTATTTTTGAATTAAAGAGTTTGGAGGTTTTGAATTTAGCTGCAAATGGGTTGAATGGTTCTGTTCCTGGTTCTGTTGGTAAGCTGAGAGGGGTATACTTGTCATTTAACCAACTTGGTGGGGTTATTCCTGAAGAGATTGGTGATAATTGTGTGACCCTGGAGCATTTGGATTTGTCTGGTAATTCTTTGGTTCAAGGGATTCCGAGGAGTTTGGGGAATTGTAGTAGGTTGAGGACGCTTTTGCTTTATTCCAATTTGTTGGAAGAGGCTATTCCTGTTGAATTTGGAAACCTTAAGAGCCTCGAGGTGTTGGATGTTTCTAGGAATACTCTAAGTGGTTCTGTGCCTCGTGAGCTTGGGAATTGTTCAATGTTGTCTGTGCTTGTGTTGTCTAACCTTTTCAACCCTCTTGGAGATGTTGGTTCTTCTGAGGGGAAGTTGGTTTCATTGAATGATGAGTTGAATTATTTTGAAGGGGAAATGCCTGTGGAAGTTGCATCACTTCCAAAGATGAGAATTTTGTGGGCTCCTATGGTGAATTTGGAAGGTAGTTTTCCAAGCAATTGGGGTGATTGTGGTAACTTGGAGATGGTTAACTTGGCTCAGAATTTCTTCACTGGGGAGTTTCCAAACCATCTTGATTTCTGCAAGAAGCTGCATTTTCTTGATTTGAGCTCAAACAACCTTACTGGGGAGCTTTCTAAGGAACTTCATGTTCCTTGTATGAGTGTGTTTGATGTTAGTGGGAACATCTTGTCTGGTTCAGTTCCTAATTTTTCCAACAATGTTTGTTCCCCTCTTCCTTTTGGGAACGGGAATCTGTTTGGAACTGATGACATGTCCCTTCCATATGCATCCTTTTTCTCATCAAAGGCTCGTGAGAGAACCCTTTTCTCATCGTTAGGGGGAGTTGGTCTTTCAGTTTTTCACAACTTCGGGCAAAACAACTTCACTGTTATTCAGTCATTGCCAATAGCACATGACAGGATGGGGGAAAAGAGTGGTTACACACTTCTTGTTGGAGAGAACAAGCTCACAGGACCATTTCCTACATATTTATTTGAGAAATGTGATGAATTAGATGCATTGCTTTTAAATGTGAGTTATAATAGGTTATCTGGTCACATTCCTTCCAATTTTGGTGGAATGTGCAAATCATTGAAGTTTTTGGATGCATCTGGAAATCAGATTGGAGGACCAATTCCTTTTTCCTTAGGGAATTTGGTCTCTCTTGTTTCCCTGAACCTCAGTGGGAATCAGTTACAGGGTCAGATTCCAACCAGCCTTGGCCAGATGAAAGATTTGAAGTTTCTTTCTTTGGCTGGTAATAACTTAAATGGCTCCATTCCTACCAGCCTGGGGCAGTTGCACTCTTTGGAAGTCTTGGACCTTTCTTCAAACTCTCTTACTGGTGAGATTCCAAAGGCTATTGAGAACATGAGAAATCTTACTGTTGTTTTGCTCAATAACAACAATCTTTCTGGACACATTCCTTCTGGTTTGGCAAATGTCGCTAAGCTCAAGGCATTTAATGTGTCTTTCAATAACTTATCTGGATCCTTGCCTTTACATAGTGGCTTGATCAAATGCAGCAGTGCTGTTGGGAATCCATTTTTAAGTTCCTGCCATGGAGTTTCTCTAACTGTGCCTTCAGCAAATCAACAAGGGCAGGTTGATGATAATTCTTCCGGTACTGCACAAGCACAAACTTCTGGCAAAGATAGTGGGAATGGTTTCAGTTCTATTGAAATAGCTTCTATAGCTTCTGCTTCAGCCATTGTTTCTGTTCTTATAGCTCTAATTGTTCTATTCTTTTACACAAGGAAGTGGAAGCCAAGGTCCAGGGTTGGTGGATCAACAAAAAAAGAAGTCACAGTGTTTACTGATATTGGGGTCCCATTGACATTTGAAAGTGTTGTCCAAGCCACTGGAAATTTCAATGCAGGCAACTGTATTGGGAATGGAGGATTTGGAGCAACCTACAAGGCAGAGATATCTCCAGGAATCTTGGTAGCTGTAAAACGTCTTGCAGTTGGCCGTTTCCAAGGTGTTCAACAATTCCATGCAGAGATCAAGACCCTTGGAAGGCTTCATCATCCAAATCTTGTCACTTTGATTGGTTATCATGCTTGTGAGACTGAAATGTTTCTCATATACAATTATTTGCCAGGTGTAGCATGGGCATGCATGTTACTGAAACAAGGTAGAGCAAAAGAGTTCTTCACTGCAGGGTTATGGGATGCAGGACCTGGTGATGATTTGGTAGAGGTTTTACACTTAGCAGTTGTGTGCACTGTTGATTCTCTCTCTACAAGACCTACAATGAAACAAGTTGTAAGAAGGCTAAAGCAACTTCAACCACCATCTTGCTAG 3030 0.4261 MFSSSSSSNSSSYCNSVIIKWSSFTQFHFLFYIFLLFLSFPQNDALSPDSDKSVLLRLKNSLSDPSGLLSTWTTVSGGGDGNSGEHCSWSGVHCDSTKRVVALNITGAGDRNPHPCSDFTQFPLYGFGIRRSCEGYKGSLFGKVPPLISELTELRVLSLPFNGLEGEIPNEIWGMEKLEALDLEGNLISGYLPFRVQGLRNLRVLNLGFNRIVGEIPGSIFELKSLEVLNLAANGLNGSVPGSVGKLRGVYLSFNQLGGVIPEEIGDNCVTLEHLDLSGNSLVQGIPRSLGNCSRLRTLLLYSNLLEEAIPVEFGNLKSLEVLDVSRNTLSGSVPRELGNCSMLSVLVLSNLFNPLGDVGSSEGKLVSLNDELNYFEGEMPVEVASLPKMRILWAPMVNLEGSFPSNWGDCGNLEMVNLAQNFFTGEFPNHLDFCKKLHFLDLSSNNLTGELSKELHVPCMSVFDVSGNILSGSVPNFSNNVCSPLPFGNGNLFGTDDMSLPYASFFSSKARERTLFSSLGGVGLSVFHNFGQNNFTVIQSLPIAHDRMGEKSGYTLLVGENKLTGPFPTYLFEKCDELDALLLNVSYNRLSGHIPSNFGGMCKSLKFLDASGNQIGGPIPFSLGNLVSLVSLNLSGNQLQGQIPTSLGQMKDLKFLSLAGNNLNGSIPTSLGQLHSLEVLDLSSNSLTGEIPKAIENMRNLTVVLLNNNNLSGHIPSGLANVAKLKAFNVSFNNLSGSLPLHSGLIKCSSAVGNPFLSSCHGVSLTVPSANQQGQVDDNSSGTAQAQTSGKDSGNGFSSIEIASIASASAIVSVLIALIVLFFYTRKWKPRSRVGGSTKKEVTVFTDIGVPLTFESVVQATGNFNAGNCIGNGGFGATYKAEISPGILVAVKRLAVGRFQGVQQFHAEIKTLGRLHHPNLVTLIGYHACETEMFLIYNYLPGVAWACMLLKQGRAKEFFTAGLWDAGPGDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQPPSC* 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01474 1009 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 364 944 - -
Rops5g01474 1009 Gene3D Ribonuclease Inhibitor 248 359 IPR032675 -
Rops5g01474 1009 Pfam Leucine Rich Repeat 272 293 IPR001611 GO:0005515
Rops5g01474 1009 Pfam Leucine rich repeat 629 688 IPR001611 GO:0005515
Rops5g01474 1009 Gene3D Ribonuclease Inhibitor 48 247 IPR032675 -
Rops5g01474 1009 Gene3D Ribonuclease Inhibitor 360 486 IPR032675 -
Rops5g01474 1009 ProSiteProfiles Protein kinase domain profile. 865 1009 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g01474 1009 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 542 769 - -
Rops5g01474 1009 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 262 356 - -
Rops5g01474 1009 SUPERFAMILY L domain-like 557 761 - -
Rops5g01474 1009 MobiDBLite consensus disorder prediction 772 795 - -
Rops5g01474 1009 Pfam Protein kinase domain 868 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g01474 1009 SMART LRR_typ_2 317 341 IPR003591 -
Rops5g01474 1009 SMART LRR_typ_2 244 268 IPR003591 -
Rops5g01474 1009 SMART LRR_typ_2 699 722 IPR003591 -
Rops5g01474 1009 SMART LRR_typ_2 272 293 IPR003591 -
Rops5g01474 1009 SMART LRR_typ_2 151 175 IPR003591 -
Rops5g01474 1009 SMART LRR_typ_2 199 223 IPR003591 -
Rops5g01474 1009 SMART LRR_typ_2 675 698 IPR003591 -
Rops5g01474 1009 SMART LRR_typ_2 627 651 IPR003591 -
Rops5g01474 1009 SUPERFAMILY Protein kinase-like (PK-like) 846 944 IPR011009 -
Rops5g01474 1009 Gene3D Ribonuclease Inhibitor 527 773 IPR032675 -
Rops5g01474 1009 Pfam Leucine rich repeat N-terminal domain 48 95 IPR013210 -
Rops5g01474 1009 SUPERFAMILY L domain-like 314 479 - -
Rops5g01474 1009 SUPERFAMILY L domain-like 49 352 - -
Rops5g01474 1009 Gene3D Phosphorylase Kinase; domain 1 828 940 - -
Rops5g01474 1009 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 365 541 - -
Rops5g01474 1009 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 829 940 - -
Rops5g01474 1009 ProSitePatterns Protein kinases ATP-binding region signature. 871 893 IPR017441 GO:0005524
Rops5g01474 1009 PRINTS Leucine-rich repeat signature 438 451 - -
Rops5g01474 1009 PRINTS Leucine-rich repeat signature 675 688 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01474 Rops-Chr5 30535930 30539751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01474 49 943 Receptor kinase-like Gene Family AT3G02130 59.653 0.0 982
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Rops5g01474 Pkinase 2.8e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01474 - - gmx:100819882 1363.59