Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01470 ATGGCCTTTGAGGAGTCTGAGCTGGTGATTCCTGAGCTAGAAAGAGAGGAAAACTTGATAGCTGCAGCAAGACACATTGTGAGGGCATTAGGGTCAAAGAAAAATCTCACTAGTGATGCCAAGAAAATTTTGGCAGATCTAGGCACCCAGTTGTCCTCCATGACCAATATCAGTGAGAAGGATGAGGAGGGTGTTAGTGACTTTAAAGATAGGCTTGATGCAATTCAGGAGATAATCATGAGATGGGAGGAAGATCAGTCTATGATTTGGGATTCTAGAGATAAAGCATCTGAATATCTGAATGCAGCTGATGAAGCTCATAGATTGATTGAAAAGTTGGAGAGCTTACATTTGAGCAAAGAGGACCAAGGGTATAAGCTTTTGCATAGGGCTTATAGTGTTCTTCAAACAGCTATGTCAAGGCTTGAAGAAGAGTTCAGGAACTTACTTATCCAAAACAGACAACCATTTGAGCCTGAATATGTGTCTTTCAGATCAAATGAAGAAGATATTGCTGATGAGAGTTCTGTAGTATCTTTAGGTGATGACTCAGTTGATGAATCATTCAGAAGAGACAGTGTCAGCAGAGCCTCAGAGGAGCAAGTCCTTGATTTAGTTCATCTAAATGTGATTCCACATCTCAGGTATATTGCAAACTTAATGTTTACTTGTAACTATGACCAGGAATGTTCCCATGCTTATACCACTGCCCGAAGGGATGCCTTAGGTGAGTGCTTATCCATTCTTGAAATGGAAAGGCTAAGCATTGAGAATGTCTTGAGAATGGAGTGGGGTACTTTAAATTCCAAAATCAAAAGGTGGATTTGGGCTGTGAAAATCTTTGTTAGGGTGTATCTTGCAAGTGAGAGGTGGCTATGTGACCAAATTTTTGGGGAAGGGGAAAATGTTAGTCTTGTTTGTTTTGTTGATGCATCTAAGGCTTCAATATTGCAACTTTTGAATTTTGGTGAAGCCATGTCCATTGGCCCTCACCAACCTGAAAAGTTGTTTAAAATTCTTGACATGTATGAGGTTCTGTCAAGCCTTGTGCCAGATATTGATGCTTTGTATTTGGATGAGGTTGGTTCTTCTGTTAGACTTCAATGTCATGAGGTTCTAAAGAGATTAGGCCATTGTGTGAAGGCAACATTTCTTGTATTTGAAAATGCCATTGCATCAAATGTATCATCAAACCCTTTTGTAGGTGGTGGGATCCATCCTTTGACCAGGTATGTCATGAATTACGTTAGAACTCTCACTGACTACAGTGAAACACTTAATCTGCTTCTGAAGGACCAAGATGAACAGGATGCCATTTTGGTATCACCTGATTCTCCAAGTGGAGTTTCCTCAATGACCCTCCACTTAAGATCAGTGGCTGCAATCTTGGAATGCAACCTTGATGATAAGTCAAGGCTATACAAAGAAGCATCATTGCAACACTTGTTCTTAATGAACAACATACATTACATGGCTCAAAAGGTGAAGGGGTCTGAACTTAAGTTGATATATGGTGATGAATGGATTAGAAAGCACAACTGGAAGTTCAGGCAGCATGCAGTCAATTATGAGAGAATTAGTTTGAGTTTCATTCTGTCCTTGCTTAAGGATGAGGGAATTCAAATTCCAGGTACAAATTCCATCTCAAAAAGTCTTCTTAAGGAAAGGTTAAGAAGCTTCTACCTTGCCTTTGAGGATCTTTATAGGAACCAAACAGCTTGGTTCATCCCAGATGTTCAGCTTCGTGAAGAATTGAGGATCTCTCTATCCCTCAAAATAATCCAAGCTTACAGGGCATTTGTAGGGAGGCATAGTAATCATATAAATGACAAATGTATTAAATACAGTCCTGATGATTTAGAAAATTATCTTCTGGATTTCTTTGAGGGAGCACCAAAATCATTGCAAAACCCTCACAGGAGGTGA 1926 0.3972 MAFEESELVIPELEREENLIAAARHIVRALGSKKNLTSDAKKILADLGTQLSSMTNISEKDEEGVSDFKDRLDAIQEIIMRWEEDQSMIWDSRDKASEYLNAADEAHRLIEKLESLHLSKEDQGYKLLHRAYSVLQTAMSRLEEEFRNLLIQNRQPFEPEYVSFRSNEEDIADESSVVSLGDDSVDESFRRDSVSRASEEQVLDLVHLNVIPHLRYIANLMFTCNYDQECSHAYTTARRDALGECLSILEMERLSIENVLRMEWGTLNSKIKRWIWAVKIFVRVYLASERWLCDQIFGEGENVSLVCFVDASKASILQLLNFGEAMSIGPHQPEKLFKILDMYEVLSSLVPDIDALYLDEVGSSVRLQCHEVLKRLGHCVKATFLVFENAIASNVSSNPFVGGGIHPLTRYVMNYVRTLTDYSETLNLLLKDQDEQDAILVSPDSPSGVSSMTLHLRSVAAILECNLDDKSRLYKEASLQHLFLMNNIHYMAQKVKGSELKLIYGDEWIRKHNWKFRQHAVNYERISLSFILSLLKDEGIQIPGTNSISKSLLKERLRSFYLAFEDLYRNQTAWFIPDVQLREELRISLSLKIIQAYRAFVGRHSNHINDKCIKYSPDDLENYLLDFFEGAPKSLQNPHRR* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01470 641 Coils Coil 65 85 - -
Rops5g01470 641 Pfam Exo70 exocyst complex subunit 272 625 IPR046364 GO:0000145|GO:0005546|GO:0006887
Rops5g01470 641 SUPERFAMILY Cullin repeat-like 67 629 IPR016159 -
Rops5g01470 641 PANTHER EXOCYST COMPLEX PROTEIN EXO70 65 630 IPR004140 GO:0000145|GO:0006887
Rops5g01470 641 Coils Coil 96 116 - -
Rops5g01470 641 Gene3D Exocyst complex component Exo70 77 637 - -
Rops5g01470 641 Coils Coil 132 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01470 Rops-Chr5 30516178 30518607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01470 12 641 EXO70 exocyst subunit family AT3G29400 46.456 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01470 K07195 - gmx:100799102 979.933