Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01443 ATGGCCAATGAAAGTGTCGAATTACCAGTGACCCCTGAATTAACTAAGTCAGATAAGGTTGAAAAAAGAAGGTTCTCTGCTGGCAAAGCTAGTTCTGGAATTAGTGATGAAAAAATTGTTCCCCATTATCTAAGAGCTTCCACCGGTTCATGTCATGATTTTTGTAAATATGGAAGGAAGCATGCATTTGAATCGAAGGAAAGACGTTCTATACCTAATAGAGCTACAAGAAAACAACTTCACCAAAGTTCAGAAGAGAGTATTGGTGGGATAATGACATCAGCTGCAAGGCCAAGAGCATCAGTTGATTCCAAGACAACAAAGAACATGTCAATGGTCAGAGAATCAGTTGATTCCAAGACCAAGATTTCTGATACCTCGGACACCAATACACATGAACTGCCAACAAAATCATTTGAAAGCCAAAAACATAAAGGTAATGAAGTTTTGGTGAACAGGAATAAAGCATCATTGGTCAAGTTCAAACCATCACCCCTTCTGAAGTCCCATACATCTCCATCAATGAAACAAGAAACTTCATCAACTGTTAAGGAGATGCAATCTCCATCAAAATCAACTGCCAAGAAGGTAGTAACTCCATCAAAATCAACTCCTAAGAAGGTGGAAACTCCATCAAAATCTACTCCCAAGAAGGTGGAAAATCCATCAAAATCAACTTCCAAGGTAAAAACTTCATCCAAATCAGCTTCCAAGATGGTGGGAGCTTCATCAGAGTTATCTTCTTTAAAAGATAAAGAAATGAAATTGTCTGAAAAACTTGTGAATTCTTTGAATTCAAACCATGCCACAAGGAAGCAGATATCTTCTAAGAATTCCTCTGAAGGCTTTGGCGGCCAAAGAGATAGTGAGATCAAGATGGAAAAGGGGGTAGCCTCCTCCAAACCAACTTCAAGAAAATTGATGGCACCTTTAAAGGGTTTATCATCCCCCAAGCCTTCTCTTAAAAGAGTTGCAAGTCTAAATTCAAGAAAGCATAAGAACCTGACACTTGTGTCCCAACTTAGGAATCGGCTAACTGCCAGAAAAGTGAAATCTGATGAACACCACAACGAGGTAGAGGAAAAGACTTTGTATGTCATCAAGATGGAAAGCGAAAACAAAACTTTACAATCTGATCAAAATGCTAGGTATGATGATGAATCATACCTCCCTCAGTTGTCATCACCCAAGTCTTCATCATCCTCAATTTCTCAATCCTTATCCCAAGAAGACCAAGAGGAATTTGAATATTCAACTAGTGAATCCGAGCAGGATTCTTCTTCAGGAAACCATGAAATTGAACACATTGGAAATGAGGGGACATCGGAAGTTAAGAAGAAAGGCAAGTCCAGAAAGGATGGGGTTGTATGTTCTGAAGACAAGGACTGCCAAATGATAAAATTAAAGTTCAGAAGGGGAAAAGTGATTGAAAATCAAATTGAGAAAAGTACTCCAAGGAGGCTTAAATTTCGGAGAGCAAAAGTGGCAGGGGGGAAAGCAAATGCAAAGGATGATGCTCAACGGAAAAGCTTTAAAACAGATGGAGCCTGTGCTGACAGCAATGATGATACAACTGGTCCAGAGAAGGTTGTATTGAGACACCAAGATATGCAGGACAAGAAAGATGCACAGGGATTGTTCAACAATGTAATTGAGGAAACAGCAAGTAAACTGGTTGAAGCTAGGAAGAGCAAGGTTAAAGCATTGGTTGGTGCCTTTGAAACTGTAATCTCTCTTCAAGACAAAAAGCCTTCTGCAAACATTGTCGGTTGA 1773 0.3948 MANESVELPVTPELTKSDKVEKRRFSAGKASSGISDEKIVPHYLRASTGSCHDFCKYGRKHAFESKERRSIPNRATRKQLHQSSEESIGGIMTSAARPRASVDSKTTKNMSMVRESVDSKTKISDTSDTNTHELPTKSFESQKHKGNEVLVNRNKASLVKFKPSPLLKSHTSPSMKQETSSTVKEMQSPSKSTAKKVVTPSKSTPKKVETPSKSTPKKVENPSKSTSKVKTSSKSASKMVGASSELSSLKDKEMKLSEKLVNSLNSNHATRKQISSKNSSEGFGGQRDSEIKMEKGVASSKPTSRKLMAPLKGLSSPKPSLKRVASLNSRKHKNLTLVSQLRNRLTARKVKSDEHHNEVEEKTLYVIKMESENKTLQSDQNARYDDESYLPQLSSPKSSSSSISQSLSQEDQEEFEYSTSESEQDSSSGNHEIEHIGNEGTSEVKKKGKSRKDGVVCSEDKDCQMIKLKFRRGKVIENQIEKSTPRRLKFRRAKVAGGKANAKDDAQRKSFKTDGACADSNDDTTGPEKVVLRHQDMQDKKDAQGLFNNVIEETASKLVEARKSKVKALVGAFETVISLQDKKPSANIVG* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01443 590 PANTHER EMB|CAB62594.1 1 278 - -
Rops5g01443 590 SMART CaM_binding_2 464 578 IPR012417 GO:0005516
Rops5g01443 590 MobiDBLite consensus disorder prediction 1 32 - -
Rops5g01443 590 MobiDBLite consensus disorder prediction 494 527 - -
Rops5g01443 590 MobiDBLite consensus disorder prediction 375 413 - -
Rops5g01443 590 MobiDBLite consensus disorder prediction 63 340 - -
Rops5g01443 590 MobiDBLite consensus disorder prediction 167 244 - -
Rops5g01443 590 MobiDBLite consensus disorder prediction 497 516 - -
Rops5g01443 590 MobiDBLite consensus disorder prediction 375 456 - -
Rops5g01443 590 MobiDBLite consensus disorder prediction 99 117 - -
Rops5g01443 590 MobiDBLite consensus disorder prediction 427 456 - -
Rops5g01443 590 MobiDBLite consensus disorder prediction 259 285 - -
Rops5g01443 590 MobiDBLite consensus disorder prediction 76 90 - -
Rops5g01443 590 Pfam Plant calmodulin-binding domain 467 578 IPR012417 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01443 Rops-Chr5 29762014 29765435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01443 528 576 Calmodulin-binding Proteins AT2G38800 46.000 7.45e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01443 - - gmx:100789388 719.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g01443 5 29762014 29765435 Rops8g00614 8 12406354 12409033 PCT