Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01436 ATGGAGGGTATGAAGAAGAGGGTAATGGGGTTAGGGTCACCAACCATGGTGTTGCTTTTTCTAGGTTTTGCTATGCTTGTTATGTTACCAGAGGCCTCAGCTACAAAGTGGAATGTTGGAGGGGGCAAGTTTTGGAACACCAATGTCAACTATACTGAATGGGCTAAGGGCAAGCATTTCTACAATGGTGACTGGCTTTTTTTTGTGTATGACAGGAACCAAATGAATGTGCTAGAAGTGAACAAGACAGATTATGAAAGTTGCAACTCAGATCATCCACTCACCAATTGGACAAGGGGATCTGGAAGAGATGTGGTTCCATTGAATGTAACCCGCAATTACTATTTCATAAGTGGCAAAGGGTTCTGCTTTAGTGGCATGAAGTTAGCCATTCATGTTGAAAACCCACCACCTCCACCAAAAGCTGCCCCTATAGAATCTGGGGCTCCTACCCTTTACTCCAAAGGACACATTCTTCTCATGCCTGTTGTTTTTGCCATTGGAGCAGCATGGGATGCATTCATTTATTCATGGTAA 537 0.4358 MEGMKKRVMGLGSPTMVLLFLGFAMLVMLPEASATKWNVGGGKFWNTNVNYTEWAKGKHFYNGDWLFFVYDRNQMNVLEVNKTDYESCNSDHPLTNWTRGSGRDVVPLNVTRNYYFISGKGFCFSGMKLAIHVENPPPPPKAAPIESGAPTLYSKGHILLMPVVFAIGAAWDAFIYSW* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01436 178 PANTHER BLUE COPPER PROTEIN 35 139 IPR039391 GO:0009055
Rops5g01436 178 Pfam Plastocyanin-like domain 45 127 IPR003245 GO:0009055
Rops5g01436 178 ProSiteProfiles Phytocyanin domain profile. 35 135 IPR003245 GO:0009055
Rops5g01436 178 FunFam Lamin-like protein 33 136 - -
Rops5g01436 178 SUPERFAMILY Cupredoxins 34 133 IPR008972 -
Rops5g01436 178 Gene3D - 33 136 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01436 Rops-Chr5 29692297 29694761 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01436 19 178 Phytocyanin Superfamily AT5G15350 53.704 1.08e-62 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01436 - - mtr:11412511 292.352