Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01435 ATGGAGGGAATGAAGAGGGTGATGCTGCTTCTAGCCTGCACTATGCTTGCCATGTTGCCAGAAGCCTCTGCTACAAGGTGGATTGTAGGAGACAACATGGGTTGGACTACCAATTTTAATTACATTACATGGACTAAGGGCAAGCATTTCTACAATGGTGACTGGCTTTTTTTTGTATATGATCGAAATCAGCTGAACGTGCTAGAAGTGAACAAGACTAATTATGAAACTTGTAACTATGATCGTCCACTCCACAATTGGACTACTGGAGCTGGAAGAGATGTGGTTCCATTGAATGTAACCGGCACTCACTATTTTGTCAGTGGCAAAGGGTTTTGCTATGGTGGCTTGAAGATGGCTATTCATGTTGAAAACATACCACCTCCACCTGTAGGTGCCCCAAGAAAAGATGAAGGGGCAGCAACTCTGCCCTTGAAGCTAGATTCTGATCTTTCTGTCATTGGTGCAGCATGGGATGCATTCATTCATTATATCTGCCAGATGTTTGATTCTTCTTTTATTTTGGTCAAAGTCAATTGTTGCTTTCTTGGAGATATAATTGACTAG 567 0.4215 MEGMKRVMLLLACTMLAMLPEASATRWIVGDNMGWTTNFNYITWTKGKHFYNGDWLFFVYDRNQLNVLEVNKTNYETCNYDRPLHNWTTGAGRDVVPLNVTGTHYFVSGKGFCYGGLKMAIHVENIPPPPVGAPRKDEGAATLPLKLDSDLSVIGAAWDAFIHYICQMFDSSFILVKVNCCFLGDIID* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01435 188 Gene3D - 23 126 IPR008972 -
Rops5g01435 188 Pfam Plastocyanin-like domain 35 116 IPR003245 GO:0009055
Rops5g01435 188 SUPERFAMILY Cupredoxins 24 123 IPR008972 -
Rops5g01435 188 FunFam Lamin-like protein 23 126 - -
Rops5g01435 188 ProSiteProfiles Phytocyanin domain profile. 25 125 IPR003245 GO:0009055
Rops5g01435 188 PANTHER BLUE COPPER PROTEIN 25 133 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01435 Rops-Chr5 29681140 29682237 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01435 9 159 Phytocyanin Superfamily AT5G15350 49.359 1.42e-52 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01435 - - mtr:11412511 232.646