Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01433 ATGGAAAATTCAAGAGTGGTGTTGGTGAATGTTATGGTGATAGGGTGGCTTTCATTGTGCCCATTGGTGGTTTTGGGAGGTCTTCATAAGGTGGGAGGCTCCAAAGGTTGGAATCAAGATGTTAACTACACTGAATGGTCTTCTCATGAGCATGTCTTTGTTGGTGATTGGCTTCTTTTCCAGTTTGACAAAAGATACTACAATGTTTTGGAAGTGAACAAGACAAGCTACGAAAATTGCATAGACAGGGACTTCATAAAAAACATCACACGAGGTGGTCGTGATGTGGTTAGATTGGATGAGGCAAGAACATACTACTACCTCTCTGGTGGAGGCTACTGTTTTCATGGAATGAAAATTGCTGTTAATGTTGAAAAACTCCCAGCACCAGCACCAGCACCAGCACCAGCACAATCTCCATTCAATATGGTCTCTGCTGGTTCTCATTTGCCATCTATGTGCACCTGCACTTGGATCATTGTTGTTAATGTGATTTATGTGAACTTGGTTTTAATGGGTATTTTGTAA 528 0.4148 MENSRVVLVNVMVIGWLSLCPLVVLGGLHKVGGSKGWNQDVNYTEWSSHEHVFVGDWLLFQFDKRYYNVLEVNKTSYENCIDRDFIKNITRGGRDVVRLDEARTYYYLSGGGYCFHGMKIAVNVEKLPAPAPAPAPAQSPFNMVSAGSHLPSMCTCTWIIVVNVIYVNLVLMGIL* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01433 175 PANTHER BLUE COPPER PROTEIN 28 135 IPR039391 GO:0009055
Rops5g01433 175 ProSiteProfiles Phytocyanin domain profile. 27 126 IPR003245 GO:0009055
Rops5g01433 175 SUPERFAMILY Cupredoxins 28 124 IPR008972 -
Rops5g01433 175 Pfam Plastocyanin-like domain 38 118 IPR003245 GO:0009055
Rops5g01433 175 FunFam Lamin-like protein 26 127 - -
Rops5g01433 175 Gene3D - 28 128 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01433 Rops-Chr5 29669988 29672817 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01433 6 160 Phytocyanin Superfamily AT2G27035 43.038 5.79e-41 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01433 - - gmx:100788336 218.009