Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01426 ATGGATGGATCAACTGGCTATGGTGGTGGTGGTGGTGGTGGAAGTATGGACATGTTTCTATCAAATTATAAGTTGGGAAGAAAACTTGGAATTGGGTCCTTTGCAGAGGTGAAAATTGCAGATCATGTATTGACTGGTCATAAAGTTGCCATAAAGATCCTCAACCGCGGCAAGATAAAGAAGAAGGAAATGGAAGAAAAAGTGAGAAGAGAAATCAAAGTTTTAAGAATGCTCATGCATCCTCACATTGTAAGAGTTTATGATGTGGTGGAAACCCCAACAAACATATATGTGGTGATGGAGTATATGTCATCTGGAGAGCTCTATGATTACATAGTACAAAAGCGTAGGTTGCAAGAAGATGAAGCTCGTAAATTTTTTCAACAGATAATCTCTGGTGTGGAGTACTGTCATAGGAATAGGGTGGTTCATAGAGACCTCAAGCCTGAGAATTTACTTTTGGACTCAAAATGCAATGTCAAGATTGCTGATTTTGGTTTGAGCAACATCATGCTTGATGGTCACTTTCTTAAGACAAGTTGTGGAAGCCCAAACTATGCAGCTCCAGAGGTTATCTCTAATAAATTGTATGCTGGACCTGAAGTAGATGTTTGGAGCTGTGGTGTAATTTTATATGCTCTTCTCTGTGGCACTCTTCCTTTTGATGATGGAAACATTCCCAACCTCTTCAAAAAAATAAAGGGTGGGATATATACCCTTCCTAGTCATCTATCACCTGGTGCCAGAGGTTTGATATAA 759 0.3953 MDGSTGYGGGGGGGSMDMFLSNYKLGRKLGIGSFAEVKIADHVLTGHKVAIKILNRGKIKKKEMEEKVRREIKVLRMLMHPHIVRVYDVVETPTNIYVVMEYMSSGELYDYIVQKRRLQEDEARKFFQQIISGVEYCHRNRVVHRDLKPENLLLDSKCNVKIADFGLSNIMLDGHFLKTSCGSPNYAAPEVISNKLYAGPEVDVWSCGVILYALLCGTLPFDDGNIPNLFKKIKGGIYTLPSHLSPGARGLI* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01426 252 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 20 252 - -
Rops5g01426 252 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Rops5g01426 252 FunFam Maternal embryonic leucine zipper kinase 14 252 - -
Rops5g01426 252 SMART serkin_6 23 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g01426 252 ProSiteProfiles Protein kinase domain profile. 23 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g01426 252 Pfam Protein kinase domain 23 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g01426 252 Gene3D Transferase(Phosphotransferase) domain 1 14 252 - -
Rops5g01426 252 FunFam Non-specific serine/threonine protein kinase 14 104 - -
Rops5g01426 252 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Rops5g01426 252 SUPERFAMILY Protein kinase-like (PK-like) 19 252 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01426 Rops-Chr5 29627798 29639449 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01426 23 252 CBL-interacting serine-threonine protein kinases AT4G24400 51.948 6.95e-87 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Rops5g01426 Pkinase 7.6e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01426 K07198 - dcr:108214725 429.483