Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01424 ATGTTGGAAGAAGATGAAACCCGCAATCTTTTTCAGCGGATAATCTCTGTTGTGGAGTACTGTCACAGGAATATAGTGGTTCATAGAGATCTGAATCTTGAGAATTTACTTTTGGACTCAAAATGCAATGTCAAGATTGATGATTTTGGCTTAAGCAACATCATGCGTGGTGGCCACTTTCTTAAGACAAGTTTTGGAAGCCTTAACTATGCAGCTCCAGAGGTTATCAATGGGAAATTGTATGTTGGATCTGAAGTAGATGTCTAG 267 0.3895 MLEEDETRNLFQRIISVVEYCHRNIVVHRDLNLENLLLDSKCNVKIDDFGLSNIMRGGHFLKTSFGSLNYAAPEVINGKLYVGSEVDV* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01424 88 Pfam Protein kinase domain 2 88 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g01424 88 PANTHER SERINE/THREONINE KINASE 2 88 - -
Rops5g01424 88 ProSiteProfiles Protein kinase domain profile. 1 88 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g01424 88 Gene3D Transferase(Phosphotransferase) domain 1 1 88 - -
Rops5g01424 88 SUPERFAMILY Protein kinase-like (PK-like) 2 88 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01424 Rops-Chr5 29619673 29620333 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01424 2 88 CBL-interacting serine-threonine protein kinases AT5G57630 51.724 2.66e-25 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Rops5g01424 Pkinase 2.1e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01424 K07198 - rcu:8283436 145.976