Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01418 ATGGCAGCTTTAGTATTGAGGGTGTCACAAGATGGAACCGGACAGTACCGGACGGTGCAGGAAGCCATTGATGCAGTGCCACTGGGAAACACTCGCCGGACGATGATTAGGGTGTCGCCGGGAATCTACCGGCAGCCACTGTATGTGGCCAAGACCAAGAACTTCATCACCCTTGTTGGTGTGTGCCCAGAGGACACTGTTCTTACATGGAACAACACTGCCACCAAAATTGATCACCACCAAAGTGCTCGGGTGATAGGGACTGGCACCTTTGGTTGTGGCAGTACCATTGTGGAAGGGGAGGACTTTATTGCTGAGAATATTACGTTTGAGAATTCTTCCCCTGAGGGTTCAGGGCAAGCAGTGGCACTTAGAGTAACAGCAGATCGATGTGCTTTCTATAATTGCAGATTCCTTGGATGGCAGGACACACTGTATTTGCATTATGGCAAACAATATTTGAAAGATTGTTATATTGAAGGAAGTGTGGACTTCATTTTTGGTAATAGCACTGCACTCTTGGAGCATTGTCATATCCACTGCAAGTCTGCAGGGTACATAACTGCACAGAGCAGAAAATCTCCAAAGGAAACAACTGGTTATGTATTCCTAAGATGTGTTATCACAGGTAATGGAGGAACTTCATATGCATATCTTGGACGACCATGGGGACCTTTTGCAAGAGTGGTTTTTGAATTCACTTACATGGATCATTGCATAAAGTCTGCTGGCTGGAATAATTGGGGGAAAGTTGAGAATGAAAGAACTGCTTGCTTCTATGAATATAGGTGTTTTGGACCGGGTTGGTGTCCATCCAAACGAGTAAAATGGGCTAGAGAATTAATGGACAAAGAAGCTGAGCAGTTTCTCATGCATGGCTTCATTGACCCAGAACCAAAGAGACCTCGGCTTGCTCAAAGAATGGCCTTGAGGATTCCTTATTCTGCTTAG 951 0.4543 MAALVLRVSQDGTGQYRTVQEAIDAVPLGNTRRTMIRVSPGIYRQPLYVAKTKNFITLVGVCPEDTVLTWNNTATKIDHHQSARVIGTGTFGCGSTIVEGEDFIAENITFENSSPEGSGQAVALRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKSAGYITAQSRKSPKETTGYVFLRCVITGNGGTSYAYLGRPWGPFARVVFEFTYMDHCIKSAGWNNWGKVENERTACFYEYRCFGPGWCPSKRVKWARELMDKEAEQFLMHGFIDPEPKRPRLAQRMALRIPYSA* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01418 316 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 5 297 - -
Rops5g01418 316 Pfam Pectinesterase 8 296 IPR000070 GO:0030599|GO:0042545
Rops5g01418 316 Gene3D - 3 305 IPR012334 -
Rops5g01418 316 SUPERFAMILY Pectin lyase-like 2 298 IPR011050 -
Rops5g01418 316 FunFam Pectinesterase 2 309 - -
Rops5g01418 316 ProSitePatterns Pectinesterase signature 2. 159 168 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01418 Rops-Chr5 29548905 29553454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01418 5 296 Carbohydrate Esterase AT5G47500 36.877 6.22e-67 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01418 K01051 - gmx:100810259 595.504