Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops5g01380 | ATGGCAAGTCCTGTTGGTGTTATGATTGGAGCTAAGAAAGTGAGAAAATCCAACAAAGATGCAAAATGTGAAGGTTCAAGTTTCTGGAGGAAACTCATGATTTTTGGATGTTGCATCACTTTAAGGTCCAAATCAGAGGGATCCTCCAGTGGAAGTAAATCTACAAAGGACAATATTAGAGACCTAGCAGATGATCCAGCAGCATCCTTATCCAACAACAATTCAGGAACTATTAGATCTACTTCCAACATATGCAAGGAAATAAAATATCAATCCCATCTTCGGAACTTCACCTTTCAAGAACTTAAGTTGGCAACAGGGAATTTCAAGCGTGAGAATTTTCTTGGTGAAGGAGGGTTTGGTACTGTATTCAAAGGTTCGATCAATGGAAACTCCAATGCAAGACCTGGAATGGGGATTCCAGTTGCAGTGAAGACTCTTAAGAAAGATGGAAATCAGGGCCATAAGGAATGGGTTGCTGAAATTATTCATCTTGGTGCTCTCCATCACCCAAATATAGTTAAATTGTTTGGTTTTTGCACAGAAGGTGAAGATAAGCCACTTGTATACGAGTTTATGCCTCAAGGAAGCTTAGAGAATCATCTGTTTAAGAGTGGAGCTTTGCCCCTTTCGTGGAATTTCAGAATGAAAATCATGCTTGGTGCTGCAAAGGGTCTTGCATTTCTACATGAGGAAGCTGAAAAGCCAATGATACATCGAGATTTCAAAACTTCTAATATCCTATTGGACAAGGACTACAATGCAAAACTTTCTGATTTTGGGCTTGTTAAAGAAGCCCCCGTGGATAGAACTCATGTGTCAACTCAAGTGATGGGAACGAAAGGCTATGCAGCCCCTGAGTATGTGATGACAGGACACCTTACTACCAAGAGTGATGTGTATAGCTTTGGGGTGGTTCTCCTTGAGGTGTTGACGGGAAGAAGAGTCCTGGACAGGCCTCACCCAGAGCAATGCTTGGTGAATTGGGCAATGTCTCAAATCAAGCATGAAGGGGGGTTCCGCACAATGATGGATCCTAGACTTCAAGGTCAATTCTCACAAGAAGGTGCTGAAAGGGCAATGAGGTTGGCTGTTCATTGCCTTTCCCATGATCATGAAGCAAGACCCGTGATGAGTGAAGTGGTTCAAGTGCTGGAGTCAATGCTTGATCACAATGACATGGCTAGTTCTTCCTCTTCACCCTCATTTCAGGGCTTTCATGTAGGCTCATCATCAAGGAACGCACCAATTCACTTTGAAACCTCCGCATGCAGCCATACCCCTCCTGTTTCTTCAACCAAAACTAGTGGTGGAAGGCCTTGA | 1323 | 0.4308 | MASPVGVMIGAKKVRKSNKDAKCEGSSFWRKLMIFGCCITLRSKSEGSSSGSKSTKDNIRDLADDPAASLSNNNSGTIRSTSNICKEIKYQSHLRNFTFQELKLATGNFKRENFLGEGGFGTVFKGSINGNSNARPGMGIPVAVKTLKKDGNQGHKEWVAEIIHLGALHHPNIVKLFGFCTEGEDKPLVYEFMPQGSLENHLFKSGALPLSWNFRMKIMLGAAKGLAFLHEEAEKPMIHRDFKTSNILLDKDYNAKLSDFGLVKEAPVDRTHVSTQVMGTKGYAAPEYVMTGHLTTKSDVYSFGVVLLEVLTGRRVLDRPHPEQCLVNWAMSQIKHEGGFRTMMDPRLQGQFSQEGAERAMRLAVHCLSHDHEARPVMSEVVQVLESMLDHNDMASSSSSPSFQGFHVGSSSRNAPIHFETSACSHTPPVSSTKTSGGRP* | 441 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops5g01380 | 440 | CDD | STKc_IRAK | 115 | 388 | - | - | |
Rops5g01380 | 440 | SUPERFAMILY | Protein kinase-like (PK-like) | 84 | 386 | IPR011009 | - | |
Rops5g01380 | 440 | ProSiteProfiles | Protein kinase domain profile. | 109 | 389 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops5g01380 | 440 | MobiDBLite | consensus disorder prediction | 420 | 440 | - | - | |
Rops5g01380 | 440 | Gene3D | Phosphorylase Kinase; domain 1 | 89 | 192 | - | - | |
Rops5g01380 | 440 | Gene3D | Transferase(Phosphotransferase) domain 1 | 193 | 407 | - | - | |
Rops5g01380 | 440 | ProSitePatterns | Protein kinases ATP-binding region signature. | 115 | 145 | IPR017441 | GO:0005524 | |
Rops5g01380 | 440 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 237 | 249 | IPR008271 | GO:0004672|GO:0006468 | |
Rops5g01380 | 440 | FunFam | LRR receptor-like serine/threonine-protein kinase IOS1 | 193 | 398 | - | - | |
Rops5g01380 | 440 | Pfam | Protein tyrosine and serine/threonine kinase | 112 | 385 | IPR001245 | GO:0004672|GO:0006468 | |
Rops5g01380 | 440 | FunFam | Serine/threonine-protein kinase BIK1 | 76 | 192 | - | - | |
Rops5g01380 | 440 | MobiDBLite | consensus disorder prediction | 44 | 74 | - | - | |
Rops5g01380 | 440 | PANTHER | OS01G0588500 PROTEIN-RELATED | 57 | 387 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops5g01380 | Rops-Chr5 | 28541229 | 28543817 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops5g01380 | 50 | 385 | Glycoside Hydrolase | AT3G07070 | 46.356 | 2.89e-101 | 306 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Rops5g01380 | PK_Tyr_Ser-Thr | 3.5e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops5g01380 | - | - | cave:132183248 | 446.817 |