Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01336 ATGAGGAACTCATGCACACTCGATCCCAAAGCATGCACCACAGCTCAAGCCATTGTCGAAGAGTGCCGTGCTCACACCATAGCCTTGGGCTGTACAAGTTTCCCTACCCACAAACACCACCCATTGTTCCAAGGTGTTCACAGTGTTGATGATTGGGCTGTGAGGTTGAGGGGTCATAAGCTTGCTCAGGTAACTCTTTTTCAGAAGCCTATTGTGAAGGTTAAGTTGGGGGATTTGATGGCTGCTACTAACAATTTCAGTGCTGAGAGTGTTCTTATTTCAACAAGGACAGGAACTACTTATAGGGCTGATCTTCCTGATGGTTCAACACTTGCTGTGAAGAGGTTGAACACTTGTAAGATTGGGGAGAAGCAGTTTCGAATGGAGATGAATCGGTTAGGCCAAGTTAGGCACCCGAATTTGGCACCCTTGTTGGGGTTCTGTGTTGTGGAAGAGGAGAAGCTGCTTGTTTATAAGCACATGTCCAATGGGACTCTTTATTCCTTGCTGCATAAGAATAGCAATGCATTGGATTGGATGATGAGGTTCAGGATAGGTTTGGGTGCGGCTAGGGGCCTTGCTTGGCTGCACCATGGTTGCCATCCTCCAATTATACAGCAGAACATCTGTTCCAATGTGATTCTTGTTGTTGAAGAATTTGATGCTCGGTTGATGAACTTTGGACTAGCAAGGCTCATGACATCTGACTCAAATGGTAGTTTTGTGAATGGAGATTTGGGGGAACTTGGTTATATTGCTCCTGAATATTCAAGTACTTTGGTTGCTTCATTGAAAGGGGATGTGTATGGGTTTGGAGTGTTGCTTTTAGAGTTGGTCACTGGGCGCAAACCTCTTGAGGTTAGCAATGATGGGGAAGAATTCAAGGGTAACTTAGTTGATTGGGTGAACATGCATTCTAGTTCAGGTAGAATCAAGGATTGCATTGATAAAGCCATATGTGGAAGGGAACATGATGAGGAGATTCTGCAGCTTATGAAAATTGCATCTAATTGTGTGGTTTCTCGCCCCAAAGATAGGTGGTCAATGTATCAGGTTTATCATTCCTTAAAGAGTTTATCCAAAGATCACAGTTTCTCTGAACATGATGATGAATTTCCCTTGATCTTTGGTAAGCCAGAAAATGAACCAGCATAG 1155 0.4381 MRNSCTLDPKACTTAQAIVEECRAHTIALGCTSFPTHKHHPLFQGVHSVDDWAVRLRGHKLAQVTLFQKPIVKVKLGDLMAATNNFSAESVLISTRTGTTYRADLPDGSTLAVKRLNTCKIGEKQFRMEMNRLGQVRHPNLAPLLGFCVVEEEKLLVYKHMSNGTLYSLLHKNSNALDWMMRFRIGLGAARGLAWLHHGCHPPIIQQNICSNVILVVEEFDARLMNFGLARLMTSDSNGSFVNGDLGELGYIAPEYSSTLVASLKGDVYGFGVLLLELVTGRKPLEVSNDGEEFKGNLVDWVNMHSSSGRIKDCIDKAICGREHDEEILQLMKIASNCVVSRPKDRWSMYQVYHSLKSLSKDHSFSEHDDEFPLIFGKPENEPA* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01336 384 Gene3D Phosphorylase Kinase; domain 1 46 160 - -
Rops5g01336 384 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 61 359 - -
Rops5g01336 384 Pfam Protein tyrosine and serine/threonine kinase 107 355 IPR001245 GO:0004672|GO:0006468
Rops5g01336 384 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 47 160 - -
Rops5g01336 384 SUPERFAMILY Protein kinase-like (PK-like) 65 356 IPR011009 -
Rops5g01336 384 Gene3D Transferase(Phosphotransferase) domain 1 161 379 - -
Rops5g01336 384 ProSiteProfiles Protein kinase domain profile. 86 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01336 Rops-Chr5 27813315 27815148 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01336 49 382 Receptor kinase-like Gene Family AT3G28450 67.160 4.58e-161 463
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Rops5g01336 PK_Tyr_Ser-Thr 4.6e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01336 - - lang:109347314 594.349