Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01315 ATGGATCCAAGGAACAGGTTTTTGTTACTTGGGTTATGCTTGTTGTGTTTTTGGGTGTTTTTAGCTTCTTCCCAGGTCGAAGAAGACGATGTTAGATGCTTAAGGGGCATCAAGGACAGCCTCAATGACCCTGAGGGTCGTCTTGCCACGTGGCGTTTTGAGAACAAAACCGTTGGTTTCATCTGCGACTTCGTTGGTGTTGAGTGTTGGAACGCAAAGGAGAATCGTGTTCTCAGTTTGGAGCTCCGTGAGATGAAGCTTTCTGGCAAGATTCCAGAGTCCTTGAAGTACTGTGGAAAAAGCTTGCAAAAATTGGATCTTGGTTCAAATTCATTCACTTCTGAGATCCCACCTGAGATCTGTAGTTGGATGCGTTTTTTGGTGTTGATGGATTTGTCAAGTAATGATCTTTCAGGTCCTATTCCCCCTACCCTTGTGAATTGCTCTTACTTGAATGAGTTGGTGTTGTCAAATAACAAACTTTCTGGTCCAATTCCTTATGAATTGGGGAGTTTGAGTAGGTTAAAGAAGTTTTCTGTGGCTAATAATCAACTTAGTGGTACTGTTCCTGCATTTTTTAATGATTCTAATAGGGATGATTTTGCTGGGAATAGTGGTTTGTGTGGTGGTCCTCTTGGATCTTGTGGTGGGTTGAGTAAGAAGAATCTTGCTATTATTATAGCTGCTGGTGTTTTTGGTGCTGCTGCTTCTTTGTTGCTTGCTTTTGGGTTGTGGTGGTGGTATCATTTGAGGTTGAGTGGGAATAGGAAGAAGGAAGGGTATGTGGTTGGTGGTGTTGATGATTGGGCTATGAGGTTGAGGGGTCATAAGCTTGCTCAGGTAACTCTTTTTCAGAAGCCTATTGTGAAGGTTAAGTTGGGGGATTTGATGGCTGCTACTAACAATTTCAGTGCTGAGAATGTTCTTATTTCAACAAGGACAGGAACTACTTATAGGGCTGATCTTCCTGATGGTTCAACACTTGCTGTGAAGAGGTTGAACACTTGTAAGATTGGGGAGAAGCAGTTTCGAATGGAGATGAATCGGTTAGGCCAAGTTAGGCACCCGAATTTGGCACCCTTGTTGGGGTTCTGTGTTGTGGAAGAGGAGAAGTTGCTTGTTTATAAGCACATGTCAAATGGGACTCTTTATTCCTTGTTGCATAAGAATAGCAATGCATTGGATTGGATGATGAGGTTCAGGATAGGTTTGGGTGCGGCTAGGGGCCTTGCTTGGCTGCACCATGGTTGCCATCCTCCAATTATACAGCAGAACATCTGTTCCAATGTGATTCTTGTTGATGAAGAATTTGATGCTCGGTTGATGGACTTTGGACTAGCAAGGCTCATGACATCTGACTTAAATGGTAGTTTTGTGAATGGAGATTTGGGGGAACTTGGTTATATTGCTCCTGAATATTCAAGTACTTTGGTTGCTTCATTGAAAGGGGATGTGTATGGGTTTGGAGTGTTGCTTTTAGAGTTGGTCACTGGGCGCAAACCTCTTGAGGTTAGCAATGATGGGGAAGAATTCAAGGGTAACTTAGTTGATTGGGTGAACATGCATTCTAGTTCAGGTAGAATCAAGGATTGCATTGATAAAGCCATATGTGGAAGGGAACATGATGAGGAGATTCTGCAGCTTATGAAAATTGCATCTAATTGTGTGGTTTCTCGCCCCAAAGATAGGTGGTCAATGTACCAGGTTTATCATTCCTTAAAGAGTTTATCCAAAGATCACAGTTTCTCTGAACATGATGATGAATTTCCCTTGATCTTTGGTAAGCCAGAAAATGAACCAGCATAG 1806 0.4247 MDPRNRFLLLGLCLLCFWVFLASSQVEEDDVRCLRGIKDSLNDPEGRLATWRFENKTVGFICDFVGVECWNAKENRVLSLELREMKLSGKIPESLKYCGKSLQKLDLGSNSFTSEIPPEICSWMRFLVLMDLSSNDLSGPIPPTLVNCSYLNELVLSNNKLSGPIPYELGSLSRLKKFSVANNQLSGTVPAFFNDSNRDDFAGNSGLCGGPLGSCGGLSKKNLAIIIAAGVFGAAASLLLAFGLWWWYHLRLSGNRKKEGYVVGGVDDWAMRLRGHKLAQVTLFQKPIVKVKLGDLMAATNNFSAENVLISTRTGTTYRADLPDGSTLAVKRLNTCKIGEKQFRMEMNRLGQVRHPNLAPLLGFCVVEEEKLLVYKHMSNGTLYSLLHKNSNALDWMMRFRIGLGAARGLAWLHHGCHPPIIQQNICSNVILVDEEFDARLMDFGLARLMTSDLNGSFVNGDLGELGYIAPEYSSTLVASLKGDVYGFGVLLLELVTGRKPLEVSNDGEEFKGNLVDWVNMHSSSGRIKDCIDKAICGREHDEEILQLMKIASNCVVSRPKDRWSMYQVYHSLKSLSKDHSFSEHDDEFPLIFGKPENEPA* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01315 601 Pfam Leucine rich repeat N-terminal domain 28 70 IPR013210 -
Rops5g01315 601 SUPERFAMILY Protein kinase-like (PK-like) 282 573 IPR011009 -
Rops5g01315 601 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 265 377 - -
Rops5g01315 601 Gene3D Transferase(Phosphotransferase) domain 1 378 596 - -
Rops5g01315 601 SUPERFAMILY L domain-like 28 218 - -
Rops5g01315 601 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 75 195 - -
Rops5g01315 601 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 378 595 - -
Rops5g01315 601 ProSiteProfiles Protein kinase domain profile. 303 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g01315 601 Gene3D Ribonuclease Inhibitor 27 215 IPR032675 -
Rops5g01315 601 CDD STKc_IRAK 311 576 - -
Rops5g01315 601 Pfam Protein tyrosine and serine/threonine kinase 324 572 IPR001245 GO:0004672|GO:0006468
Rops5g01315 601 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 27 216 - -
Rops5g01315 601 Gene3D Phosphorylase Kinase; domain 1 265 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01315 Rops-Chr5 27528550 27530722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01315 9 599 Receptor kinase-like Gene Family AT3G28450 64.441 0.0 779
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Rops5g01315 PK_Tyr_Ser-Thr 1.9e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01315 - - lang:109347314 931.013