Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01296 ATGGATTTAGTTCTGAATTGCATAAACACCATTACAATTGCATTGCTTTCCCTAATCATCTTGTGTTTGTTTCTGTTTCGTCCCTCCAAAGTTGCTCATGGTAGAGAAGCTCCCACAGTGGCAGGTGCTTGGCCTATACTAGGTCACTTCCCACTATTGAATGGTTCACAAGCACCCCACAGAACCCTTGGTGCCTTGGCTGAAAAATATGGACCCCTTTTCACCATTAAGCTTGGTGTCAAACGTGCTTTGGTAGTTAGCAATTGGGAAATGCCAAAAGAATGCTACACCACATATGACATGTTCATTTGCAATCGTCCCAAGCTTATTGCAATCGAACAATTGGCCTATAATGGAGCCATGTTTGGCTCTTCACTCTATGGTTCCTATTGGCGCCAACAAAAAGAACGAGTCCAACTATATGTTGGTGGACTTGAAGGAATGGTTTACTCACTTGACATCTCGCATTGTTTTTCCAATGATGATTGGGAAGGATATTTTAGTGAAAGGAATGTGGTTGAGGATCAAGAAGCACAAAGATGTATAAAAGCTTTAAGGGAATTAATGCATTTGTTTGGAGTTTTCACAGTGGGAGATGCAGTTCCTTATTTGAGACGGTTTGATTTTGGTGGCCATGAGAAGGCCATGAAAGAAACTGCTAAGGAATTGGATACAATTGCAGGAGTTGATGCTGATACAATAATCAAATCCACAATATTGTCACTAATAATGGGAGCAATTGACACAAATGCTATTACCCTTATATGGGAAATATGTTTACTATTGAGACATCCTCATGTATTGGAAAAGGCAAAAGAAGAACTTGATACGCAAGTTGGGAAAGAAGGATGCATAAGGGAGTCAGATATAAGTAAGTTGGTATACCTTCAAGCTATAGTCAAAGAAATGCTAAGACTGTATCCACCGGCCTCTCTTTCATTACCTCGTGAATTCTCAGAGAATTGCACTTTAGGTGACTATGATGTTAAAAAAGGAACTCGACTAATCATAAATCTTTGGAGGATCCACACTGATCCTAATATATGGTCAAATCCATTAGAGTTCAAACCAGAAAGGTTCCTCACCACTCATAAAGATGTTGATGTGAAAGGTCAACATTTTGAGTTATTACCATTTGGATGTGGGAGAAGGATTTGTCCTGGAATGTCATTTGGTCTTCAAATGGTTCATTTAACTCTGGCTAGTTTATTACATTCCTTTGATATTTTAAATCCATCAACTGAACTTGTTGATATGACCGAAACCTTTGGATTCACTAGCAACAAAACTACTCCCCTTGAGATTCTTGTTAAACCACGCTTGTCCCTAAATGTTATGAAATGA 1344 0.3891 MDLVLNCINTITIALLSLIILCLFLFRPSKVAHGREAPTVAGAWPILGHFPLLNGSQAPHRTLGALAEKYGPLFTIKLGVKRALVVSNWEMPKECYTTYDMFICNRPKLIAIEQLAYNGAMFGSSLYGSYWRQQKERVQLYVGGLEGMVYSLDISHCFSNDDWEGYFSERNVVEDQEAQRCIKALRELMHLFGVFTVGDAVPYLRRFDFGGHEKAMKETAKELDTIAGVDADTIIKSTILSLIMGAIDTNAITLIWEICLLLRHPHVLEKAKEELDTQVGKEGCIRESDISKLVYLQAIVKEMLRLYPPASLSLPREFSENCTLGDYDVKKGTRLIINLWRIHTDPNIWSNPLEFKPERFLTTHKDVDVKGQHFELLPFGCGRRICPGMSFGLQMVHLTLASLLHSFDILNPSTELVDMTETFGFTSNKTTPLEILVKPRLSLNVMK* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01296 447 Gene3D Cytochrome P450 229 440 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01296 447 FunFam Cytochrome P450 82C4 224 438 - -
Rops5g01296 447 PRINTS P450 superfamily signature 298 309 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01296 447 PRINTS P450 superfamily signature 245 262 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01296 447 PRINTS P450 superfamily signature 377 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01296 447 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 379 388 IPR017972 GO:0005506|GO:0016705
Rops5g01296 447 PRINTS E-class P450 group I signature 338 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01296 447 PRINTS E-class P450 group I signature 386 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01296 447 PRINTS E-class P450 group I signature 297 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01296 447 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01296 447 PRINTS E-class P450 group I signature 376 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01296 447 Gene3D Cytochrome P450 30 228 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01296 447 Pfam Cytochrome P450 233 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01296 447 Pfam Cytochrome P450 41 136 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01296 447 SUPERFAMILY Cytochrome P450 43 440 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01296 447 PANTHER CYTOCHROME P450 82C3-RELATED 169 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01296 Rops-Chr5 27270451 27272676 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01296 18 441 Cytochrome P450 AT4G31940 39.448 7.27e-116 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01296 - - gmx:100803451 559.296