Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01294 ATGGATTTGGTCCTAAATTTCCTAAACACCACCACCGTTACAATCTTTTCTATAATTTTCTTGAGTTTGTTTCTGCGTCTCCTTTCAAACTCCAAAGCGGGTCATGGTAAAGAACCTCCTACTGTGGCAGGTGCTTGGCCTATACTTGGTCACCTCCCACTACTGAGTGGTTCACAAACACCCCATAGAACCTTGGGTGCCTTGGCTAACAAATATGGACCCCTATTCACCATCAAGCTTGGTGCCACACGTGCTTTGGTACTAAGCAATTGGGAAATGGCCAAGGAATGTTTCACCAAAAACGACTTGGCCATTTCCTCTCGCCCCAAGCTTATTGCAACTGAACATATGGCCTATAATAGAGCCCTTTTTGGCTTTGCACCCTATGGTCCCTATTGGCGCCAACTGCGTACGATTATAACTTTAGAGATCCTTACCAATCGTCGAGTGGAGCAACTAAGCCATGTTCGTGTCTCTGAAGTTCAAACTTCGATCAAAGAGCTCTTCAATGTTTGGTGTAGCAAAAAGAATGAGTCAAACTATGTGTTGGTGGAGTTGAAGCAATGGTTTAACCAGTTGACATTCAACATGGTTCTTCGAATGGCAGTTGGGAAGAGATATTATGGTGCTACGAATGTGGTTGATGAGGAAGAAGCAGAGAGATGTACAAAAGCTTTAAGGGAAATGATGCGTTTGCTGGGAGTATTCACAGTGGGAGATGCTATTCCTTATTTGAGATGGTTTGATTTTGGTGGCCATGAGAAGGCCATGAAAGAATCTGCTAAGGATTTGGACACAATTTTAGGTGAGTGGTTAGAGGAGCACCGCCAGAACAGAGCTTTGGGTGAAAAGGTTGAACATGATCAAGACTTCATGGACACCATGCTTTCATTACTTGATGGTACAACAATTGAAGGGTTTGATGCAGATACCATAATCAAAGCCACAGTTCTGGCACTAATTTTGGGAGGAACTGACACAAGTAGTGTTACTCTTATATGGGCAATATGTTTGCTATTGAGAAATCCTCTTACATTAAAAAAGGCAAAAGAAGAACTTGACACTAAAGTTGGGAAAGAGAGACGCATAAGTGAGTCAGATATAAATAAATTGACATACCTCCAAGCCATAGTCAAAGAAACACTAAGACTATATCCACCAGCCTCTCTCTCAGGACCTCGAGAATTCTCAGAAAATTGTACTTTTGGTGGTTATGATGTCAAAAAGGGAACTCGACTAATCGTAAACCTTTGGAAGATACACACAGATCACAATGTATGGTCGGATCCATTGGAGTTCAAACCAGAGAGGTTCCTTACTACTCATAAAGATATTGATGTTAGGGGTCATCATTTTGAGTTGCTACCATTTGGATCTGGGAGAAGGATTTGTCCTGGAATATCCTTCGGTCTTCAAACGATTCATCTAACTCTTGCTACTTTTTTGCATTCCTTTGAAATCTTAAATCCATCAACTGAGCTTGTTGATATGACTGAATTCTTTGGATTAACCAACACTAAAGCTACTCCGCTTGAGATTTTCGTTAAACCACGTTTGTCTCCTAATTGTTATGGAATCATGTGA 1584 0.4122 MDLVLNFLNTTTVTIFSIIFLSLFLRLLSNSKAGHGKEPPTVAGAWPILGHLPLLSGSQTPHRTLGALANKYGPLFTIKLGATRALVLSNWEMAKECFTKNDLAISSRPKLIATEHMAYNRALFGFAPYGPYWRQLRTIITLEILTNRRVEQLSHVRVSEVQTSIKELFNVWCSKKNESNYVLVELKQWFNQLTFNMVLRMAVGKRYYGATNVVDEEEAERCTKALREMMRLLGVFTVGDAIPYLRWFDFGGHEKAMKESAKDLDTILGEWLEEHRQNRALGEKVEHDQDFMDTMLSLLDGTTIEGFDADTIIKATVLALILGGTDTSSVTLIWAICLLLRNPLTLKKAKEELDTKVGKERRISESDINKLTYLQAIVKETLRLYPPASLSGPREFSENCTFGGYDVKKGTRLIVNLWKIHTDHNVWSDPLEFKPERFLTTHKDIDVRGHHFELLPFGSGRRICPGISFGLQTIHLTLATFLHSFEILNPSTELVDMTEFFGLTNTKATPLEIFVKPRLSPNCYGIM* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01294 527 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01294 527 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01294 527 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01294 527 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01294 527 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01294 527 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01294 527 PRINTS E-class P450 group I signature 416 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01294 527 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01294 527 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01294 527 FunFam Cytochrome P450 82C4 29 516 - -
Rops5g01294 527 Gene3D Cytochrome P450 24 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01294 527 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01294 527 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01294 527 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01294 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Rops5g01294 527 Pfam Cytochrome P450 43 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01294 527 SUPERFAMILY Cytochrome P450 40 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01294 527 CDD CYP82 73 518 - -
Rops5g01294 527 PANTHER CYTOCHROME P450 82C3-RELATED 17 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01294 Rops-Chr5 27197275 27199566 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01294 8 524 Cytochrome P450 AT4G31940 50.000 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01294 - - gmx:100805047 785.408