Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01292 ATGGATTTAGTTCTAAATTGCCTAATTAACACCACAGCAATTGGAGTCCTTTCTCTTATATTCATATATTTGTTTCAATATTGTTCATCCAAAGTGACCCATGGCAAAGAGGCTCCCATAGCTGGATTTGCATGGCCAATACTTGGTCACCTTCCACTATTTAGTGGTTCACAAACAACCCATAGAACCTTGGGTGCCTTGGCTGATAAATATGGACCCATTTTCACCATCAAGCTTGGTGCCACACGTACTTTGGTACTCAGCAATTGGGAAATGGCCAAGGAATGTTTCACCACAAACGACGTGGTCGTTTCTTCTCGCCCCAAGCTTGTTGCAACTGAACTTATGGCCTTCAATAGAGCCATGTTTGGCTTTGCACCCTATGGTTCCTATTGGCGCCAAATGCGTAAGACAGTTATTTTAGAGTTCCTCACCAATCACCGAATCAAGCTACTAAGCCAAGTTCGTGTCTCTGAAGTTCAAACTTCAATTAAAGAGCTATTCAATGTTTGGTGTAGCAAAAAGAATGAGTCAAACTATGTGTTGGTGGAGTTGAAGCAATGGTTTAACCAGTTGACATTCAACATGGTTCTTCGAATGGCAGTTGGGAAGAGATATTATGGTGCTACGAATGTGGTCAATGAGGAAGAAGCATTGAGATGTACAAAAGCTTTAAGGGAAATGATGCGTTTGTTGGGAGTATTCACAGTGGGAGATGCTATGCCTTATTTGAGATGGTTTGATTTTGGTGGCCATGAGAAGGCCATGAAGGAAACTGCTAAGGATTTGGACACAATTTTAGGAGAGTGGTTAGAGGAGCATCGCCAGAACAGAGCTTTGGATGTAAAGGCTGATCATGATCAATACTTCATGGACACGATGCTTTCTTTACATGATGGTACAACAATTGAAGGGTTTGATGCCGATACCATCACCAAAGCCACAGTATTGGGACTAATTTCAGCAGCAACTGACACAAGCATTGTTACCCTTATATGGGCGATATGCTTGCTATTGAGAAATCCTCTTATATTGAAAAAGGCAAAAGAAGAATTCGATACCCAAGTTGGAAAAGAAAGATGTTTAAATGAGTCGGATATAAGTAACCTGGTATACCTTCAGGCCATAGTTAAAGAAACACTAAGATTGTATCCACCCGCCCCTCTTTCATTACCTCGTGAATTCTCAGAACATTGCACTTTAGGTGGTTATGATGTCAAAAAGGGAACCCGACTAATCATTAATCTTTGGAAGATCCACAGAGATCCAAATGTATGGTTAGACCCATTGGAATTCAAACCAGAAAGGTTCCTTACCACCCATAAAGATGTCGATATTAAGGGTCATCATTTTGAGCTTTTACCATTTGGATGCGGAAGAAGGATTTGTCCAGGAATGTCATTCGGTCTTCAAATGGTTCATTTAACTTTGGCTAGCTTTTTGCATTCCTTTGATATCTTAAATCCATCAACTGAACTTCTTGATATGACTGAATCCTTTGGATTAACCAACACCAAGGCTACTCCGCTTGAGATTATGGTTAAACCACGTTTGTCTCCTAATTGTTATGAAATGGCCATTTGA 1584 0.4047 MDLVLNCLINTTAIGVLSLIFIYLFQYCSSKVTHGKEAPIAGFAWPILGHLPLFSGSQTTHRTLGALADKYGPIFTIKLGATRTLVLSNWEMAKECFTTNDVVVSSRPKLVATELMAFNRAMFGFAPYGSYWRQMRKTVILEFLTNHRIKLLSQVRVSEVQTSIKELFNVWCSKKNESNYVLVELKQWFNQLTFNMVLRMAVGKRYYGATNVVNEEEALRCTKALREMMRLLGVFTVGDAMPYLRWFDFGGHEKAMKETAKDLDTILGEWLEEHRQNRALDVKADHDQYFMDTMLSLHDGTTIEGFDADTITKATVLGLISAATDTSIVTLIWAICLLLRNPLILKKAKEEFDTQVGKERCLNESDISNLVYLQAIVKETLRLYPPAPLSLPREFSEHCTLGGYDVKKGTRLIINLWKIHRDPNVWLDPLEFKPERFLTTHKDVDIKGHHFELLPFGCGRRICPGMSFGLQMVHLTLASFLHSFDILNPSTELLDMTESFGLTNTKATPLEIMVKPRLSPNCYEMAI* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01292 527 SUPERFAMILY Cytochrome P450 43 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01292 527 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01292 527 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01292 527 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01292 527 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01292 527 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01292 527 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01292 527 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01292 527 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01292 527 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01292 527 CDD CYP82 72 517 - -
Rops5g01292 527 FunFam Cytochrome P450 82C4 29 515 - -
Rops5g01292 527 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01292 527 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01292 527 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01292 527 Pfam Cytochrome P450 44 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01292 527 Gene3D Cytochrome P450 26 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01292 527 PANTHER CYTOCHROME P450 82C3-RELATED 19 523 - -
Rops5g01292 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01292 Rops-Chr5 27132041 27134178 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01292 19 523 Cytochrome P450 AT4G31970 48.728 2.06e-180 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01292 - - gmx:100803451 755.747