Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01291 ATGGATTTAATAATCCTCAATTGCCTAAACCCCACCACCGTTTTTGCACTCTCTTCTCTAATTTTCTTGTGTTTGTTTCTATTTCACCTCTCCAACTCCAAAGTTGGTCATGGTAGAGAAGCTCCTATAGTGGCAGGTGCTTGGCCAATACTTGGTCACCTTCCATTGTTGAGTGGTACACAAACACCCCATAGAACCCTTGGTGCCTTGGTTGAAAAATATGGACCCCTTTTCACCATCAAGCTTGGTACCAAACGTGCTTTGGTACTAAGCAATTGGGAAATGGCTAAGGAATGCTTCACCAAAAACGACATTGCCGTTTCCTCTAGGCCTAAGCCCATTGCAGCTGAACTCATGTCGTACAACCTAGCCTTCATTGGTTGGGCACCTTATGGGACATATTGGCGTGAATTGCGTAAGATTGTTACTTCTGAGTTCCTCTCCAATCGCAAAACCGAGCTTTTAAGCCACATTCGTGTAACCGAAGTTCAAACTTCGATTAAGGAGCTGTTTGATGTTTGGTCCAATCAAAAGAATGAGTCTAACTATGTCTTGGTTGAGATGAAGCAATGGTTTTCTCAATTGACACTCAACATGGTTCTCCAAATGGTTATTGGGAAGAGATATTTTGGGGCTACAAATGTGACCGATGAGGGACAAAGGTTTCTAAAAAATATAAGAGAGTTTATGCGTTTGATAGGGACTTTCACGGTGGGAGATGGTGTCCCTTGTCTAAGATGGTTGGATTTGGGTGGCTATGAGAAGGACATGAAGAAAACTGCAAAGGAATTTGACCAAATGTTGAGTGAATGGTTAGAAGAGCACCGACAAAAGAGGGCTTTGGGTGATGATAAGGTTGGGAGGGACCAAGACTTCATGGACGTGATGCTCTCAGTTCTTAATGACACACAGATTGATGGGTTTGATGCTGATACCATAATCAAAGCCACAACTTTGGAATTAATTTTGGGAGGAGCTGACACAACTGCTACTATCCTTACATGGACGGTGTCTTTGTTATTAAGAAATCCTCTTATATTGGGAAAAGCTAAAGAAGAACTTAATACGCAAGTTGGGGAAAAAAGATGCATATGCGAGTCAGATATAAATAAATTAGTATATCTTAAAGCTATAGTTAAGGAGACAATGAGGTTATATCCACCAGCTCCTCTTTCATCACCTCGTGAATTCACAACTGACTGCACTTTAGGTGGCTTCTACGTCAAAAAGGGAACTCGACTAATTCCAAACCTATGGAAGATCCATAGAGACCCTAGTGTTTGGTCAGATCCATTGGAGTTCAAACCTGAAAGATTCCTTACCACTCACAAAGAAGTTGATGTTAGGGGTCATCATTTTGAATTGTTACCATTTGGAAGTGGGAGACGGATTTGTGCTGGAATGTCCCTTGGCCTACATATTCTTCATTTCACTTTGGCTAATTTTTTGCATTCGTTTGAAATCCTAAATCCATCTTCTGAGCCAATTGATATGACTGAATTCTTTGGATTTACCAACAATAAAGCCACTCCACTTGAGATTTTAGTTAAACCACGTTTGTCTCCAAACTGTTATGCCACTATATGA 1587 0.4089 MDLIILNCLNPTTVFALSSLIFLCLFLFHLSNSKVGHGREAPIVAGAWPILGHLPLLSGTQTPHRTLGALVEKYGPLFTIKLGTKRALVLSNWEMAKECFTKNDIAVSSRPKPIAAELMSYNLAFIGWAPYGTYWRELRKIVTSEFLSNRKTELLSHIRVTEVQTSIKELFDVWSNQKNESNYVLVEMKQWFSQLTLNMVLQMVIGKRYFGATNVTDEGQRFLKNIREFMRLIGTFTVGDGVPCLRWLDLGGYEKDMKKTAKEFDQMLSEWLEEHRQKRALGDDKVGRDQDFMDVMLSVLNDTQIDGFDADTIIKATTLELILGGADTTATILTWTVSLLLRNPLILGKAKEELNTQVGEKRCICESDINKLVYLKAIVKETMRLYPPAPLSSPREFTTDCTLGGFYVKKGTRLIPNLWKIHRDPSVWSDPLEFKPERFLTTHKEVDVRGHHFELLPFGSGRRICAGMSLGLHILHFTLANFLHSFEILNPSSEPIDMTEFFGFTNNKATPLEILVKPRLSPNCYATI* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01291 528 Gene3D Cytochrome P450 29 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01291 528 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01291 528 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01291 528 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01291 528 SUPERFAMILY Cytochrome P450 47 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01291 528 PRINTS E-class P450 group I signature 95 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01291 528 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01291 528 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01291 528 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01291 528 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01291 528 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01291 528 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01291 528 PRINTS E-class P450 group I signature 195 213 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01291 528 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01291 528 FunFam Cytochrome P450 82C4 31 517 - -
Rops5g01291 528 PANTHER CYTOCHROME P450 82C3-RELATED 21 525 - -
Rops5g01291 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Rops5g01291 528 CDD CYP82 75 519 - -
Rops5g01291 528 Pfam Cytochrome P450 47 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01291 Rops-Chr5 27107498 27110075 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01291 12 525 Cytochrome P450 AT4G31940 48.184 2.88e-177 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01291 - - gmx:100789386 783.482