Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01281 ATGGCATCATCATCTAACACTCTCTTAACAACATTGTTGTTGTCAGTGTTGTTACTATTGCCCATGTTCATTACCCCATCACAAGGTAAACTCACCTTAGATTTCTACAAACAAACATGTCCACAATTCAACCAAATCATCCAAGACACTGTCACCAACAAACAGATCAACAGCCCCACCACCGCCGCCGCCACCATCCGCCTCTTCCTCCATGACTGCCTCCTCCCTAACGGTTGCGACGGCTCACTCCTCCTCTCCTCAACACCCTTCAACAAAGCCGAACGTGACGCCGACATCAACCTTAACCTCCCCGGAGACGCATTCGACCTCATCGTACGCGCTAAAACCGCACTCGAACTCGCGTGTCCCAACACCGTTTCATGTTCCGACATCCTCGCAACCGCCACGCGTGACCTTCTAATAATGTTAGGTGGACCCCACTACCCCGTCTTCCTCGGCCGCCGTGACGGCGTCGTTTCACGGTCCTCCGACGTTGATGGCCATCTTCCGAAACCGAACATGCCCATGTCGCAAATCATCGGAATCTTCACACAACGAGGTTTCTCTGTTGAGGAAATGGTCGCGTTAAGTGGTGCTCACACTGTTGGGTTAACCCATTGTTCAGAATTCAGTGCCGACATTTACAACAATAGTGGTTCTTCACAATATAACCCTCGTTTTGTTCAGGGGTTGAAGAATGCTTGTGCTGATTATAGAAATAACCCAACTTTATCTGTTTTTAATGATATTATGACACCTAACAAGTTTGATAATGCTTACTTCCAGAACCTTCCGAAGGGTTTGGGGGTGTTGAAATCGGATCATGGGTTGTATGGTGACCCTTCTACGAGATCCTTAGTGGAGAAATTTGCAGCGGATCAAGATTTGTTCTTTAAGGTTTTTGGTCGTGCAATGCAGAAGCTTAGTCTTTTGGGTGTGAAAACTGGGAGAAGAGGAGAGATCAGACGCAGGTGTGATCAGATTAATTGA 990 0.4747 MASSSNTLLTTLLLSVLLLLPMFITPSQGKLTLDFYKQTCPQFNQIIQDTVTNKQINSPTTAAATIRLFLHDCLLPNGCDGSLLLSSTPFNKAERDADINLNLPGDAFDLIVRAKTALELACPNTVSCSDILATATRDLLIMLGGPHYPVFLGRRDGVVSRSSDVDGHLPKPNMPMSQIIGIFTQRGFSVEEMVALSGAHTVGLTHCSEFSADIYNNSGSSQYNPRFVQGLKNACADYRNNPTLSVFNDIMTPNKFDNAYFQNLPKGLGVLKSDHGLYGDPSTRSLVEKFAADQDLFFKVFGRAMQKLSLLGVKTGRRGEIRRRCDQIN* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01281 329 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g01281 329 PRINTS Haem peroxidase superfamily signature 144 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g01281 329 PRINTS Haem peroxidase superfamily signature 126 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g01281 329 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g01281 329 PRINTS Haem peroxidase superfamily signature 192 207 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g01281 329 FunFam Peroxidase 170 308 - -
Rops5g01281 329 ProSiteProfiles Plant heme peroxidase family profile. 30 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g01281 329 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01281 329 PRINTS Plant peroxidase signature 106 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01281 329 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01281 329 PRINTS Plant peroxidase signature 191 203 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01281 329 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01281 329 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01281 329 PRINTS Plant peroxidase signature 125 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01281 329 PRINTS Plant peroxidase signature 144 159 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01281 329 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01281 329 CDD secretory_peroxidase 30 328 IPR033905 GO:0004601|GO:0042744
Rops5g01281 329 SUPERFAMILY Heme-dependent peroxidases 31 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops5g01281 329 Pfam Peroxidase 51 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g01281 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 192 202 IPR019793 -
Rops5g01281 329 Gene3D - 34 329 - -
Rops5g01281 329 Gene3D Peroxidase, domain 2 170 308 - -
Rops5g01281 329 PANTHER - 13 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01281 Rops-Chr5 26934121 26935311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01281 27 329 Peroxidase AT3G28200 66.776 4.91e-152 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01281 K00430 - gmx:100798144 484.952