Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01275 ATGGTTAAAGCCATAATTCTAAATCAAAAAGAAGATATTTCGGAATTCCCTGAGTTGAAGGTTAGAGGATTGTCAACAATGGAAGATCTTATAATTCTTATATTATATCATAAGAATTTTTCAGGAAGACTTAAATCTCTCTCCAACAGCTTGCGGTATCTTCTATGGGATGGTTATCCGTTTGCTTCTTTGCCATTCCAATTTGAACCATATCTTCTTGTTGAATTGAATATGCCTTGCAGCAGCATTCAACGACTATGGGGAGGTCGCAAGTGTCTCCGTTTTTTGAAAAAGATGGATATGAGCAACTCCACATATCTGGAAGAGACTCCTGATTTTAAAATGATCCCAAACCTTGAGCATTTAGACCTTACAGGATGCACGAACTTATCAGAGATCCATTCATCAATCGGATTTCTTAAAAAACTTGCATTCTTGTCTTTGAGAAACTGTAGCAGTCTGGTTAGTCTCGATTTTGGCAGCGAATCTTGTTTGAGTTCGTTAAAAGTTCTACACCTCTCTGGTTGCACGAAACTTAAAAATACCTCTTTTAAATGGGCCATAAATCTTGAGCACCTTGATATGGATCGATGTACAAGTTTATTCATGGTTGATAAATCTATTTGGTCTCTTACAAAGCTTAGATTATTGAGTTTAAGCTATTGCACAAATCTTGTCATCGTGCCCAAGAACTTCGAGACCACGACGTCTCTTATAACTCAAGATTTACACGATGACATTGAACTTCAAAATCTTCCCTCGATACATATTTTCAATACTTATGATATGAAATCTTTGATTTCTGTGGATGTAAGCTTTTGCAATCTACTTTATGTACCTGATTCAATTGGACAGTTGGGGTGTTTAGAAAGACTTAATCTACAAGGAAACAACATTGTTTCAGTAACTTCTACCATCGAGAGGCTTGATCGTCTAGCATATTTAAATGTGGCTCATTGTCATAAGCTTGAACACTTACCTAAGCTGCCAATAGGAATGGATACATCAGGGGGAAGGTATTTTGAAATAAAATCTCGATCTCGTGACGATAGGTCAGGATTATATATTTTCGACTGTCCCAAGCTGGCTCACACGTTGCCCATAGTTTATGATGATATGTCCTCCATCAGATACTATAAACATCCCCTCCTTTATGAATTTCAATGGCTACGAATTCTAGTTGAGCAACCCCATCACTTTCGGTGTGGCTTTGACATTGTTGTTCCTTGGGACTGGGGAAAAAATGGTTCCCCACAGGATCCAATTATTCCAACGTGGTTCAAGCATCGATTTGAGGGGGGTTCAATAATAAGGATAATGAACTCTGATGTTGGTGACAATTGGACTGGCTTTGTCTTTTCTGTAGCATTTGAGGTAAACAGTCATCTTGCAATTACTAATTCTTCACATCACCCATCTTCCTTGCCACTGCCACATCCTTTTTATCTTTCTTTTGAAAGTGAAGACACTGAAGAACGCTTTGATATGGCACTTAATTTGGAAGTAAACAAGATTGATGGCTCAAAACATCTTTGGATAATCTATATATCTCGACAGCACTGCTATTTTATGAAAAAAGAAGCATGCATCACATTTAAAGCCAAGCCAGGTTTGATGATGAAGCAATGGGGGTTGGGCATGCTAACTAAGGAGGACTTAAAGGCATTCAAAATGATACATGTGGAACGATGTCATCCCCCATCATTCGATGCAGATAATCTTGTCATTAATAATGTAAAAGAAGGCAGCAACATTTCTGAGCCTAAAATCCAACGTCCTTACAATTGGTCAGTTTCTGAAGAAGATGAAGTTGAGAATAATAAAGCCTAA 1830 0.3776 MVKAIILNQKEDISEFPELKVRGLSTMEDLIILILYHKNFSGRLKSLSNSLRYLLWDGYPFASLPFQFEPYLLVELNMPCSSIQRLWGGRKCLRFLKKMDMSNSTYLEETPDFKMIPNLEHLDLTGCTNLSEIHSSIGFLKKLAFLSLRNCSSLVSLDFGSESCLSSLKVLHLSGCTKLKNTSFKWAINLEHLDMDRCTSLFMVDKSIWSLTKLRLLSLSYCTNLVIVPKNFETTTSLITQDLHDDIELQNLPSIHIFNTYDMKSLISVDVSFCNLLYVPDSIGQLGCLERLNLQGNNIVSVTSTIERLDRLAYLNVAHCHKLEHLPKLPIGMDTSGGRYFEIKSRSRDDRSGLYIFDCPKLAHTLPIVYDDMSSIRYYKHPLLYEFQWLRILVEQPHHFRCGFDIVVPWDWGKNGSPQDPIIPTWFKHRFEGGSIIRIMNSDVGDNWTGFVFSVAFEVNSHLAITNSSHHPSSLPLPHPFYLSFESEDTEERFDMALNLEVNKIDGSKHLWIIYISRQHCYFMKKEACITFKAKPGLMMKQWGLGMLTKEDLKAFKMIHVERCHPPSFDADNLVINNVKEGSNISEPKIQRPYNWSVSEEDEVENNKA* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01275 609 Gene3D Ribonuclease Inhibitor 185 367 IPR032675 -
Rops5g01275 609 Gene3D Ribonuclease Inhibitor 7 184 IPR032675 -
Rops5g01275 609 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 25 181 - -
Rops5g01275 609 SUPERFAMILY L domain-like 23 332 - -
Rops5g01275 609 Pfam Leucine Rich Repeat 73 89 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01275 Rops-Chr5 26878973 26885279 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01275 39 292 WRKY Transcription Factor Family AT4G12020 37.023 4.01e-27 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01275 - - vra:106778604 565.459