Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01253 ATGTCTCAAGGTTACGCAATCGAGCTTTACATGGACCCTGCGTTGGAGAACCAGGTTCTGAAAGCATGGAACGTTCTTGCACGAAGACAAATCAGCACTGAGTTAATCGAAATGGGGTCACGCCCTCACATCACTCTCTTCTCCACTCCCTTTCTAGAACCTTCTTCCAAGCTCGAGAACCTTCTCAAGAACCTTTCTTCCAAGCACGACCCTTTCCCTCTCTCTTTCTCTTCAATTGGTGCGTTCCCAAGTGATCAAAACGTTCTCTTTCTCTCTCCTACCCCTTCTCTCTCTCTCCTCCATTTTCAGTCACAGCTCTGTGACGCTATCAGGAAGGAAGGCATTGATGTTGGTGATGAGTACTCGCTTGGTAACTGGATACCACATTGTTCGGTTGCGCATCATGTTCCTAAAGCGAGGATGGCAGAGGCTTTCTCTCTCTTGAGGGAACTGAAATTGCCGGTTACCGGTTATGCTGTTGATGTTGCATTGGTTCAGTTCTCTCCGGTTCAAGAACTCTTCTCCTCTGTGCTTGTTTTTCTTATTGACTGGCTGGAAAACACTGAAATAGATATTCTCCTGGCTGTTGTCTCCTGGACCCAAGGCATGAAGGATCAAAGGCAAGACAAAGCAGTGGTGGCAACTTCTGTTCCAGAATTGGGAAGCAGTGCAACTGAGGAGTGGGAAGAGAAAATTCGGAGGGGCATTTTGTCATTCCACTAA 723 0.4716 MSQGYAIELYMDPALENQVLKAWNVLARRQISTELIEMGSRPHITLFSTPFLEPSSKLENLLKNLSSKHDPFPLSFSSIGAFPSDQNVLFLSPTPSLSLLHFQSQLCDAIRKEGIDVGDEYSLGNWIPHCSVAHHVPKARMAEAFSLLRELKLPVTGYAVDVALVQFSPVQELFSSVLVFLIDWLENTEIDILLAVVSWTQGMKDQRQDKAVVATSVPELGSSATEEWEEKIRRGILSFH* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01253 240 Gene3D Cyclic phosphodiesterase 5 173 - -
Rops5g01253 240 Pfam 2'-5' RNA ligase superfamily 41 166 - -
Rops5g01253 240 PANTHER - 1 178 - -
Rops5g01253 240 SUPERFAMILY LigT-like 4 147 IPR009097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01253 Rops-Chr5 26656331 26661108 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01253 1 175 Calmodulin-binding Proteins AT5G40190 66.857 1.53e-79 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01253 - - gmx:100802388 270.396