Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01245 ATGAGTCTGACTATAGGGATGGACAGAAGGTCCTGTTACAGAGACTTACTGCCATTTGTGGTGCTTGTTGCTAATGAATGCAGCAACACAGGCTTATTCACTTTGTTCAAAGCAGCCTCCTCACAAGGGATGAGTAACCATGTCTTTGTTGCCTATGCTTATGCTGTTGCAACTATGGTACTCCTTGTTGTGTCTTTTTTCTACACAAGATCAAGAGTTGTTCCTCCACTCAGTTTCTCCATCCTATCCAAAATTGCTCTTCTTGGAGTGATAGGATATTCATCTCAGATCTTGGGGTATATTGGCATCAGTTACAGTTCTCCCACACTTTCCTCTGCAATCAGCAACCTGATTCCTGCTTTCACCTTCATACTTGCCATTATTTGCAGGATGGAAAAGATAGCTGTAAAAAGTAGAACTACCCTAGCTAAGGTTTTGGGCAGCATTGTATCAATATCAGGTGCATTTGTAGTGACTTTCTACAAAGGCCCATCAATAATCATAGCTGATGATTCCCCTTCCTTTCACCTCCCACAATCAAATGACATTCTTACTTCAGTGGATAAAAATTGGGCCATTGGTGGGCTTCTACTGACAGCATGTAATATACTACTTACACTATGGTTCATTTTCCAGGTGAAAATCTTGAAGGAGTTCCCAGATGAACTAATTATGGTGTTCTTTTACAACTTGTTTGCAGCCATAGTAGCTGCTACTGTAGGTTTATTAGCAGAAACAAATAGAAGTGCTTGGAAAATTAGACCAGATATATCTTTGATCTCCATTGTTTGCACTGGAATATTTAATAAGTTCCTTAGCAGTTCAATATATGCCTGGGGAATACACTTAAAGGGGCCTGTATATGTAACAATGTTCAAGCCACTGTCAATTGTTTTTGCTGTTGCCATGGGGATTATGTTCCTTGGTGATACTCTTCATATAGGAAGTATAATTGGAGCCACAATAATATCAATTGGGTTTTATACTGTAATGTGGGGCAAAGCATCAGAAGAGAAGGAGGAAGAGGAGGATGTTGATAGCCAGGAATCACCAAATACTGAGAATTTTCCACTTTTACAAAGCCATAAAACTGTAAATTCTGAAAAGAAAATGGATGGAAGTGTATAG 1128 0.3927 MSLTIGMDRRSCYRDLLPFVVLVANECSNTGLFTLFKAASSQGMSNHVFVAYAYAVATMVLLVVSFFYTRSRVVPPLSFSILSKIALLGVIGYSSQILGYIGISYSSPTLSSAISNLIPAFTFILAIICRMEKIAVKSRTTLAKVLGSIVSISGAFVVTFYKGPSIIIADDSPSFHLPQSNDILTSVDKNWAIGGLLLTACNILLTLWFIFQVKILKEFPDELIMVFFYNLFAAIVAATVGLLAETNRSAWKIRPDISLISIVCTGIFNKFLSSSIYAWGIHLKGPVYVTMFKPLSIVFAVAMGIMFLGDTLHIGSIIGATIISIGFYTVMWGKASEEKEEEEDVDSQESPNTENFPLLQSHKTVNSEKKMDGSV* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01245 375 PANTHER WAT1-RELATED PROTEIN 17 343 IPR030184 GO:0016020|GO:0022857
Rops5g01245 375 MobiDBLite consensus disorder prediction 339 375 - -
Rops5g01245 375 MobiDBLite consensus disorder prediction 350 364 - -
Rops5g01245 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 335 - -
Rops5g01245 375 Pfam EamA-like transporter family 33 159 IPR000620 GO:0016020
Rops5g01245 375 Pfam EamA-like transporter family 194 331 IPR000620 GO:0016020
Rops5g01245 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 54 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01245 Rops-Chr5 26514080 26517586 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01245 7 364 Nodulin-like Gene Family AT3G28050 48.509 3.95e-118 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01245 - - gmx:100811686 575.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g01245 5 26514080 26517586 Rops5g01245 5 26514080 26517586 ECH