Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01244 ATGGCAAGAAGATGGTCCTTTTACAGGAATTTGCTGCCACCGGTGGTGATTATAGGCAATGAATTCAATGACACGGGAACATTAACTCTCTTCAAAGCAGCCACCCTGCAAGGGATGAACAACCATGTTTTTGTTGCTTATGCTTATGCTATTGCAACTACTATACTCCTTCCTGTGGCCTTTTTCAACAGAAGATCAAGAGTGGTTCCTCCACTCAGTTTCTCTATAATATCCAAAATTGTTCTTCTTGGGGCTATAGGAAGTACATCCCAGATACTGGGATATGTTGCCATTAATTACACTTCTCCAACACTTGCTTCAACGATTGGCAATCTTGTACCTGCTTTCACTTTCATGCTTGCAGTCACTTTCAGGATGGAAAAGTTAGCTGCAAAGAGTAGAAGTAGTCAAGCTAAGGTAATGGGAAGCATCATATCAATAGCTGGTGCATTTGTACTGACTTTCTACAAAGGTCCAGCCATCATCAATGCTCATACCCATCTCACCTTACCACTTCAACAGCCAATTCACTTTCTTAAATCAGAGGATGCAAGATGGACCATTGCTGGCATTCTGCTGATAGCTGACTATTTTCTAGTTTCACTATGGTACATTTTACAGGTGAATATCTTGAAAGAGTTCCCGGATGAACTAACTCTAGTATTCTTTTACAACGTGACTGCCACCATCTTATCTACAACTGTTGCTTTATTTATAGTGCCAAATGCAAGTGCTTGGAAAATAGGACTGAATATTTCACTGATCTCCATTGTTTGCTCTGGAATTTTTGGGAAGTTAGTAAGCAGTGTAGTTTTTGCCTGGGCGCTGCACTTAAAAGGGCCTGTCTATGTAACATCATTCAAGCCACTCCAAATTGTTATTGCTGTTGTCTTGGGTGTTATGTTCCTTGGTGATACCCTTCATGTTGGGAGCATAGTTGGAGCTGCAATAATATCAATTGGCCTTTATGCTGTATTGTGGGGCAAATCAAAAGAAGAGATAGAGGAAGATATTGGTAGCCTGGAATCACCAACCACAGAGAATGTTCCTCTCTTGCAAAGCTACAGAACTGAAACTTTTGAAAAGAAAACAATTGGAAATGTTTGA 1107 0.4038 MARRWSFYRNLLPPVVIIGNEFNDTGTLTLFKAATLQGMNNHVFVAYAYAIATTILLPVAFFNRRSRVVPPLSFSIISKIVLLGAIGSTSQILGYVAINYTSPTLASTIGNLVPAFTFMLAVTFRMEKLAAKSRSSQAKVMGSIISIAGAFVLTFYKGPAIINAHTHLTLPLQQPIHFLKSEDARWTIAGILLIADYFLVSLWYILQVNILKEFPDELTLVFFYNVTATILSTTVALFIVPNASAWKIGLNISLISIVCSGIFGKLVSSVVFAWALHLKGPVYVTSFKPLQIVIAVVLGVMFLGDTLHVGSIVGAAIISIGLYAVLWGKSKEEIEEDIGSLESPTTENVPLLQSYRTETFEKKTIGNV* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01244 368 PANTHER WAT1-RELATED PROTEIN 13 340 IPR030184 GO:0016020|GO:0022857
Rops5g01244 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 236 331 - -
Rops5g01244 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 156 - -
Rops5g01244 368 Pfam EamA-like transporter family 27 154 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01244 Rops-Chr5 26509133 26513041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01244 1 358 Nodulin-like Gene Family AT3G28050 46.900 3.83e-113 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01244 - - gmx:100790743 579.326