Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01240 ATGAAGATAATAATGGCTGTTAGAATTCTTTCATCTCTGCAATATGTCTCTTCTTCTGCCTCAGCTTCTAAACGTTGTTTAGGCCTATATTGTAGTTGGTATAGAAGTATCAGTGGAATTGGAGCTTCTGCTGCTGCTGATGTGGAGCCTAGCAAACCACCTGTGCAAATTGATCATAGTCAGCTTCTGATTAATGGACAATTTGTTGATGCAGCTTCTGGAAAAACTTTTCCAACCTATGATCCTAGGACAGGAGATATAATTGCTAATGTTGCTGAAGGTGATAGTGAAGATGTAAATCGTGCTGCCCATGCTGCTCGCAAGGCTTTTGATGAGGGACCATGGCCAAAGATGACAGCTTATGAAAGATCACGTATAATTTTTCGCTTTGCTGATTTATTGGAAAAACACAATGATGAAGTTGCAGCAATTGAAACATGGGATAGTGGGAAGACTTATGATCAAGCTGCAAATGTTGAAATACCTATGGCGGTTCGTGTGTTTCGGTATTACGCGGGTTGGGCAGATAAAATTCATGGTCTAACAGTTCCAGCTGATGGACCATACCATGTCCAAACCTTGCATGAGCCTATTGGTGTAGCAGGGCAGATTGTTCCTTGGAATTTCCCACTTCTTATATCTTCATGGAAGGTCGCGCCTGCATTAGCATGTGGTAATACAGTTGTGTTGAAAACTGCAGAACAGACTCCTCTTTCTGCCCTTTATATGTCGAAGCTGTTTCTTGAGGCAGGACTTCCTCCTGGTGTTCTAAATATTATCTCTGGCTTTGGTCCTACTGCTGGTGCAGCTTTGTGCAGTCATATGAATGTTGACAAGGTTGCTTTCACAGGATCCAGTAGCACTGGTAAGATTGTGCTACAACTATCTGCACAAAGCAATCTGAAGCCAGTAACTCTAGAGCTGGGTGGAAAATCTCCCTTCATTGTGTGCAAGGATGCTGATGTTGATGCAGCTGTTGAAGCTGCACATTCTGCCTTATTCTTTAATCAGGGCCAATGTTGTTGTGCTGGTTCTCGCACATTTGTTCATGAAAGTATATATGATGAATTTGTGGAAAAAGCTAAAGCTCGTGCCCTTAAACGTGTGGTTGGAGACCCTTTCAAAAATGGAGTTGAGCAAGGGCCTCAGATTGATTCTATGCAATTTGAGAAGATCCTGAAATACATAAGATCAGGAGTTGAAAGTGGTGCTACACTTGAATCTGGTGGTGAAAGAATTGGCTCCAAAGGCTATTACATCCAACCTACAGTTTTCTCAAATGTTCAGGACAACATGTTGATAGCAATAGATGAGATCTTTGGTCCAGTACAATCTATCTTAAAATTCAAGGATCTAGAGGAGGTGATAAGAAGGGCCAATGCAACTTCCTATGGCCTGGTTGCTGGAGTTTTTACTCAGAATATGGACACTGCTAACACCTTGATGCGAGCATTGCGAGTTGGATCAGTGTGGATCAACTGCTATGATGTCTTTGATGCAGCAATACCTTTTGGTGGGTATAAGATGAGTGGACAAGGGAGAGTAAAAGGAATCTACAGCCTTAGCAGCTACCTTCAAGTTAAAGCTGCTGTTACTTCTTTGAAGAATCCAGCATGGCAGTAG 1623 0.4221 MKIIMAVRILSSLQYVSSSASASKRCLGLYCSWYRSISGIGASAAADVEPSKPPVQIDHSQLLINGQFVDAASGKTFPTYDPRTGDIIANVAEGDSEDVNRAAHAARKAFDEGPWPKMTAYERSRIIFRFADLLEKHNDEVAAIETWDSGKTYDQAANVEIPMAVRVFRYYAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIVPWNFPLLISSWKVAPALACGNTVVLKTAEQTPLSALYMSKLFLEAGLPPGVLNIISGFGPTAGAALCSHMNVDKVAFTGSSSTGKIVLQLSAQSNLKPVTLELGGKSPFIVCKDADVDAAVEAAHSALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPFKNGVEQGPQIDSMQFEKILKYIRSGVESGATLESGGERIGSKGYYIQPTVFSNVQDNMLIAIDEIFGPVQSILKFKDLEEVIRRANATSYGLVAGVFTQNMDTANTLMRALRVGSVWINCYDVFDAAIPFGGYKMSGQGRVKGIYSLSSYLQVKAAVTSLKNPAWQ* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01240 540 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 334 345 IPR016160 GO:0016491
Rops5g01240 540 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 310 499 IPR016163 GO:0016620
Rops5g01240 540 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 48 529 - -
Rops5g01240 540 SUPERFAMILY ALDH-like 58 533 IPR016161 GO:0016491
Rops5g01240 540 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 64 528 IPR016162 GO:0016491
Rops5g01240 540 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 306 313 IPR029510 GO:0016491
Rops5g01240 540 Pfam Aldehyde dehydrogenase family 68 529 IPR015590 GO:0016491
Rops5g01240 540 FunFam Mitochondrial aldehyde dehydrogenase 2 312 501 - -
Rops5g01240 540 CDD ALDH_F2BC 57 532 - -
Rops5g01240 540 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 64 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01240 Rops-Chr5 26419173 26423629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01240 5 539 Aldehyde Dehydrogenase Gene Family AT3G48000 72.812 0.0 836
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01240 K00128 - gmx:100798892 961.059