Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops5g01234 | ATGGAACTCACCGATTCCACCGCCGGCGACAAGAACCACGAATCGACGTCGTTTCACAGAGACAAAGACAAAGACTCTCGCTCCTTTCTAGGAATCGACCTCAACGAGATCCCTTCTCCTTCTTCTTCCTTTGCTGAAACCCTACCGGACTCCGCCGTCGACATCGTCCGCGCTTATCACGAGAATCCTGCTCCACCTCCTGGAGGTCCTGCGGTTCTCCCTGGTGGTTTTACTCCATGCGCCGCCTGTGCTGGTGGTGGCGGAGGGAGCGGTTTTCTTGTCTGTGATGGCTGTGAGCGTGGTTTCCACATGGCATGTGCAGGGATTCGCAGCGGCGGTCGTCAGGTTGGGAACCTTGATGAGTGGGTTTGTGGCGAGTGTGTCTCCGGCGGGGTGAAGAGTAAGCGGTGGCCGTTGGGTGTGAAGAGTAAGCAGCTTCTTGATATCAACGCTTCCCCGCCGAGTGATGCCGACGGTGATGGTGGTGGTGAGGAGTTGCAAGATTCGAGAAAGCACACTCTGGGTGATAAATCTTTTGGTGCCAATCCTTTTGGTGCCCCAGTGACGTATTCAAACTTCTACAACGGGAGTGCTTTTGGCTTCCAAAGGGCATCTGGAGTTGTGACGCATGCTGTTAGAGTGGGTTTTGAGGATATATTGAATCATAGCCAATCAATGACTAGAAGTTTTGAGGAGGCTCTTAGAGATTTTATATCTGAAAGGCGTGGCGTACTAGAGGAAGGTTGGCGAGTGGAATTTAGACAATCAATGAGCAGCTCTGAATTGTATGCAGTTTACTGTGCACCAGATGGAAAGATATTTGATTCTGTGTATGAAGTAGCTTGTTATCTGGGACTATCATCTGGCTACAATTCTATGGAATCTGAAATAAGAAATGAAAGGTCTCTCCCTTCTTTTGGTGGGCCTCACCTATCCAGAAAAAGAAAGTCAGCTAGAACTCTAGTTGCCAATGGTTTTGCGGAAAAGCGGGGAACCTCAACCAATAGTAATTGTAAGGATCCTCCTTCTGATGGTTTAAGCATGGAATGTGCTAGTGCTCGGGGGAATGTCCCAAAAGCCACTGACATTGGAAATAAAGAGGATGGTCACACTCTTCCTCAGCAATCTGCTGATGTACTCCCTCTACAGTTCGAGGACTTCTTTGTTCTTTCTTTGGGAAAAGTTGATGGGAGACCTTCATATTATGATGTTAACCTTATCTTTCCTGTAGGCTATAAATCTTGTTGGCATGATAAGATTACTGGCTCTCTTTTTACATGTGAGGTTTTGGAGGGTGGTGATTCTGGACCTATATTTAGGATCAGAAGGTGTTCCTGTTCAGAGTTTCCTGTTCCAGTTGGGTCAACCATCCTCTCAATATCAAGTCTTTGTCAGTTCATGAGTCAAACCAATGAAAAAGGTGAGAGAAAGACTAATGGTAGTATGGATTTAGATGGTGATGAAAGTATCCAAATGATGCTTTTAGACCCTTGTGTGCCAACGGAAAATGATGTCTTAAGTTGTGTTGCAAGTTGCTCAAATGAAGCATATAATAGTCATGCATCAGATGTATCACAGCCTGTTGCTGGTTCAGTTCAACATAATACTAGAAATTTGTTAGCTGATAACATGGGTTTTATTGATGTGATTGGTGAAATTTTGGTGGAAGAGCAATCGTCATTCTCAGCATGGAGAGTTATTTCTCAAAAGTTAGTCAATGCTTGCAAGGATATCTGCGAGCAGAAAGGAACTCTCAAATTCTATTGTAAACATGTTGAAAATGAAACATGCTCACATAAATGGGATTTAAGGAATGGAAAAAGTGATACACACTTCACTTCATTGGATAAATTTTGTGGCTCACTTGGTTCAGTGAGCATTCCAGATGTAATTTATGCAGACAATGATCTGAAAGGTCTCTACGAGGTGTTAGGAAAATGGTTGGAGCAGGATAGATTTGGGTTAGATGTTGAATTTGTGCAAGAAGTATTGGAACAGCTTCCTGGTGTTCCAGACTCTTTGCAGTATGAACTTCTGAATAGTAGAAGTAATAGCTCTTCATTGCCAACAGTAGAAAATGGTTTCCTAGTGGTTGATTGGAGAGGTGGATCAAAATATGATGAAGAAGAAGCAGTTCAAGGTTTATATAGGAGGCCCAAGAAGGTGAGGATGACTGAAAAATGTGTTGAGGAAGATCGTTGTCCGCCTCCTGGGAAACCACTATGCTCTAGGGCTCCTAGTGAACTCATTGGTGACATTTTTCAGGCTTGGGAGCTTTTAGAGCGATTTCGGGAAATTCTGGACCTGAAAGAGCCATTGTCATTAGATGAGCTTGAGAAGGAACTTATCAACCCATGGTTTGATGGATTGGATTTTCTTGAGAATTCTGAGAAGGAAATGGATGGCAGTCAAGTTTTAAGTCTACATGGAGATGATAGTAATTGCAGACCATTGTCCCCAAGATGTGAAGCTGGTCCATCAGGTTCCACAGAAAGTTCACACGCTTTTATTCAAGTAGAAACAGAAGCAATGAAAGAGGCTGCTCAAGTTAAGCTCGCTTCTTTCACTTATGCCAGATGCTTTGGTGTAGCTTTGACCAAGGCTCATAATTCATTGCTAAGAGTGCTAATAGGTGAACTGCAATCAAAGGTGGCTGCCCTGGTGGATCCAAATTCTGAACCTGGAGAGACACGAACAAGACGAGGAAGAAGGAAAGATATAGATAGTGCAGTTCCTGCTAAACGAACCAAGCTCAATATGCTTCCTATTAATGAATTAACTTGGCCAGAATTAGCTCGTAGATATATATTGGCTTTCTTATCAATGGATGGTAATCTTGAGTCTGCAGATATTACTGCTCGTGAAAGTAGTAAAGTATTTCGTTGCTTACGAGGTGATGGAGGTTTGCTGTGTGGTTCCCTTACTGGTGTGGCTGGGATGGAAGCAGATGCACTGTTGCTTGCGGAGGCTACAAAGAAAATTTTTGGTTCTTTGAGCAGAGAAAATGATGTACTAACCATGGAAGAAGAGGAGTCTGATGCAAAGGGTGATTCTGAAAAGAATTTGGCGAATCATGGTAGTATTCCTGAATGGGCGAAATTGCTGGAACCTGTCAGAAAGCTACCAACAAATGTGGGAACTCGAATCAGGAACTGTGTGAAAGAGGCTCTAGAAAAGGATCCACCAGAGTGGGCGAGGAAAAAACTGGAGCATTCAATCAGCAAGGAAGTGTACAAGGGAAATGCATCTGGACCAACGAAGAAAGCAGTTCTTTCAGTGTTGGCTGAGGTAGTTGGTGAAGGATTACAACCGAATCCCAATAAAGGAAGGAAAAAGAAGATTGCTATTTCTATTTCTGACTTTATCATGAAACAATGTCGCATTGTATTACGTCGTGCAGCTGCCGCAGATGATTCAAAGGTTTTCTGCAATTTGCTAGGAAGAAACTTAATGAATTCTTCGGATAATGATGATGAGGGGCTTCTTGGATCTCCAGCTATGGTGGCCCGTCCTCTTGACTTCCGGACTATTGACCTAAGATTGGCTTCTGGAGCTTATGGTGGATCCCATGAAGCTTTTCTTGAGGATGTACGTGAGCTGTGGAACAATGTTCGTGTTGCTTTTGGGGATCAACCTGATTTAGTTGATCTGGCTGAAAAATTATCCCAGAATTTTGAATCATTGTATATTGAAGAGGTTGTCACCTTTGTCAAAAAATTTGTGGAGTATGGTAAACTGGAATGCTTAAGTGTGGAAATGAAAAAAGAAGTTGACGAATTTATTGTGTCAACAAGTGAGATTCCGAAGGCCCCTTGGGATGAGGGAGTCTGTAAAGTATGTGGCATTGATAGGGATGATGACAGTGTTCTGCTATGTGATACTTGCGATGCTGAGTATCATACATATTGCTTGAATCCTCCACTTGCAAGGATCCCTGAAGGAAACTGGTACTGTCCTTCTTGTCTTGATGGTAAACATGCAACTCAAGATGTCACGGAACGTTCACTGATTATTGGCAAACGTCGAAGTAAAAAATTCCAGGGAGAAGCTAAATGTCTTTACTTGGAAGCTCTAGCTCATTTATCAGCTGTAATGGAAGAAAAAGAATACTGGGAGTACAGTGTGGGCGAGAGAACTTTCCTTCTCAAGTTTTTATGTGATGAGTTGCTTAACTCTTCCCTGATACGCCAGCACCTTGAGCAATGTACAGATTTGTCTGTTGAGTTACATCAGAGATTGCGTACACTATCTGTAGAGTGGAAAAACCTGAAAACTAAAGAAGATAGTTTATCCACAAAAGCTGCAAAAATTGATACATTCTCACTAAATACTGCTGCTGGAGAAGTTGGTCTTAAGGAAGGATTGACAACTTTGTCCTCAAATACTGGTAAATGTCTGGTGCAGCCCCTTACTGCAGCTGACAATTCTGGTAATTTTGGGGTATTTGTTGATAGTCTGCCTTCAGAAGAGACTACCAAAGAGAAGTATAGGTTCAATAGTGTTGATAAAAGCGTATCTGTGACAAATTCAGATTCTGATAGCCAAAATATGAATTCCATAGATGTAGAGGGACAACATAGGAATGTTTCTGGGGCTGTTGAATCTCAATGTACTGATAAGTCCCCTAAGTATTTTCCATCACCAAGTCATATGCCACAAGACACAAATGGTTCTGGTGGAGCAGCTCACATCCAGTGTAATCACCAGAAATGTGAGGGAAGGGATATATCTACTCTTGTGACATACCAGCAAGGACAACGTGTGCCTGTTGAAGTTCCTCAGACTGCTGTTAATGAGTCAGAACCCTACCAGCTTGAGCTCAATGCCATTCGGCAGGATATTTCACTACTGCAGGACTCCATAACTAGTGTAGTATCACAGCTGCTGAAGCTCTCTGTTCGCCGGGAATTTTTGGGTATTGATTCCATTGGTCGACTGTACTGGGCTATGGTTACATCCAGGGGACGTTCGCGTATAGTTGTTGATGCAAGCGCTTTACTGCTGCATGGAAGAGGAATGGCAGCTGGCAAAGACTCTCTGGAGAATGTTTCTGCTCTGCAGCATGGTGCACTATCTTATAAGGATAACTATAAGATGTTAGGGGTGTTCAAGGACTCCTCTCCTTCAATGTCTCAACCAAGTAATGCTTTGGGCAATAGTTCACCATGGATTGCTTATGAAAATGATGCAGAAATTGAAGGGCTTTTAGGTTGGCTAAATGATGATGACCCTAAAGAAAGAGAACTGAAGGATTCCATTATGCTGGGGCCAAAATCAAGATTTCAAGAGTTTATTAATGCACAGACTGAAGGTCAGGTTAAGGACCAAGGACATATCTCTATGCCAAGAAATAGAGAGAAAATGGTATCTAGTTCTCTTGTTACGAAGGCCACTTCCTTGCTGGAAAAGAAATATGGTCCCTTCTTTGAGGTGTCGAAGAAGCAAAGTAAAAAGGCCAGAGCAACTAATGATGAAAAGTTGTATAGGTGTGAGTGCCTAGAACCCATATGGCCTTCTAGGAAACACTGCATGTATTGCCACAAAACTGTTCTGAGTGATATTGAATTTGTGGGGCACAATGATGGCAAATGTAATGCGGGTCTTCTGGCTTTGGAGAAGAATAAGGATAAAAATGGATCTTCCAAAGGAAAAGGGAACTTGAAATGTGACCCCTCACTTGAAAAATTCAGAGCTAATGGAGAAACGGATGGAACCTCAATTAATGGACGTTCTAAGCTTAGCTCAAGATTGATTAAATTTTCAAATGAAGAATCCACCTGCCCGTTTAACTTTGAAGATATATGTTTGAAGCTTGTGACAAATGATTCCAACAAGGAACTTGTCAGAGAAATAGGTCTTATTGGTTCAGATGGGATCCCGTCCTTTGTTCCTTCCATATCTCCTTTTGTTAGTGATTATATACCATTGTCAGCTCAAAAGGATGATAGGGTTGTTGGTGGTGCATCCCTAGCTTCAGAAAGCCAGGTTTGTCAGGGAAACATGGATGGAGCTGGCGACCATAAATCAGGCATTTCTACTGAAAGGTTAGCTTCAAATGAAAGCAATAATGCAGGAAAATCCAACAAGTCATCTTTGGGAGTACAAAGAGATGGAAAGTTTTCTTTTTGTAGTCCTGCTTCAGATATGGGAGTTGATGGCTGCTGTGTGGTCCCTTCGTCTTCCTTGAGACCATTAGTTGGAAAAGTTTCTCATATTTTGAGGCAATTGAAGATTAATATACTTGATATGGATGCTGCACTCCTGAATGTTGCTCTAAGATCATCAAAGGCACAGTCAGACAGAAGACAGGCCTGGCGTGCATTTGTTAAATCTGCAGAGACTATATATGAGATGGTTCAGGCAACAATTACACTGGAGGATATGATTAAGACGGAGTACTTGAGGAATGACTGGTGGTACTGGTCATCGTTCTCAGCTGCTGCCAAATCTTCTACTTTGCCTTCCCTTGCCCTGCGCATATACTCCCTTGATTCAGCCATTATATATGAGAAAATGCCCAATTCAAGTCTTACTGACAGCTCTGAACATTCTGCCATAGTGGAACAGAAACTGCCAATTGCTGTTGATGCAGAGAAATCCAAAGCAAGCCGGAAGTCGAACAGGAAAAGGAAGGAACCAGATGGTTGA | 6648 | 0.4263 | MELTDSTAGDKNHESTSFHRDKDKDSRSFLGIDLNEIPSPSSSFAETLPDSAVDIVRAYHENPAPPPGGPAVLPGGFTPCAACAGGGGGSGFLVCDGCERGFHMACAGIRSGGRQVGNLDEWVCGECVSGGVKSKRWPLGVKSKQLLDINASPPSDADGDGGGEELQDSRKHTLGDKSFGANPFGAPVTYSNFYNGSAFGFQRASGVVTHAVRVGFEDILNHSQSMTRSFEEALRDFISERRGVLEEGWRVEFRQSMSSSELYAVYCAPDGKIFDSVYEVACYLGLSSGYNSMESEIRNERSLPSFGGPHLSRKRKSARTLVANGFAEKRGTSTNSNCKDPPSDGLSMECASARGNVPKATDIGNKEDGHTLPQQSADVLPLQFEDFFVLSLGKVDGRPSYYDVNLIFPVGYKSCWHDKITGSLFTCEVLEGGDSGPIFRIRRCSCSEFPVPVGSTILSISSLCQFMSQTNEKGERKTNGSMDLDGDESIQMMLLDPCVPTENDVLSCVASCSNEAYNSHASDVSQPVAGSVQHNTRNLLADNMGFIDVIGEILVEEQSSFSAWRVISQKLVNACKDICEQKGTLKFYCKHVENETCSHKWDLRNGKSDTHFTSLDKFCGSLGSVSIPDVIYADNDLKGLYEVLGKWLEQDRFGLDVEFVQEVLEQLPGVPDSLQYELLNSRSNSSSLPTVENGFLVVDWRGGSKYDEEEAVQGLYRRPKKVRMTEKCVEEDRCPPPGKPLCSRAPSELIGDIFQAWELLERFREILDLKEPLSLDELEKELINPWFDGLDFLENSEKEMDGSQVLSLHGDDSNCRPLSPRCEAGPSGSTESSHAFIQVETEAMKEAAQVKLASFTYARCFGVALTKAHNSLLRVLIGELQSKVAALVDPNSEPGETRTRRGRRKDIDSAVPAKRTKLNMLPINELTWPELARRYILAFLSMDGNLESADITARESSKVFRCLRGDGGLLCGSLTGVAGMEADALLLAEATKKIFGSLSRENDVLTMEEEESDAKGDSEKNLANHGSIPEWAKLLEPVRKLPTNVGTRIRNCVKEALEKDPPEWARKKLEHSISKEVYKGNASGPTKKAVLSVLAEVVGEGLQPNPNKGRKKKIAISISDFIMKQCRIVLRRAAAADDSKVFCNLLGRNLMNSSDNDDEGLLGSPAMVARPLDFRTIDLRLASGAYGGSHEAFLEDVRELWNNVRVAFGDQPDLVDLAEKLSQNFESLYIEEVVTFVKKFVEYGKLECLSVEMKKEVDEFIVSTSEIPKAPWDEGVCKVCGIDRDDDSVLLCDTCDAEYHTYCLNPPLARIPEGNWYCPSCLDGKHATQDVTERSLIIGKRRSKKFQGEAKCLYLEALAHLSAVMEEKEYWEYSVGERTFLLKFLCDELLNSSLIRQHLEQCTDLSVELHQRLRTLSVEWKNLKTKEDSLSTKAAKIDTFSLNTAAGEVGLKEGLTTLSSNTGKCLVQPLTAADNSGNFGVFVDSLPSEETTKEKYRFNSVDKSVSVTNSDSDSQNMNSIDVEGQHRNVSGAVESQCTDKSPKYFPSPSHMPQDTNGSGGAAHIQCNHQKCEGRDISTLVTYQQGQRVPVEVPQTAVNESEPYQLELNAIRQDISLLQDSITSVVSQLLKLSVRREFLGIDSIGRLYWAMVTSRGRSRIVVDASALLLHGRGMAAGKDSLENVSALQHGALSYKDNYKMLGVFKDSSPSMSQPSNALGNSSPWIAYENDAEIEGLLGWLNDDDPKERELKDSIMLGPKSRFQEFINAQTEGQVKDQGHISMPRNREKMVSSSLVTKATSLLEKKYGPFFEVSKKQSKKARATNDEKLYRCECLEPIWPSRKHCMYCHKTVLSDIEFVGHNDGKCNAGLLALEKNKDKNGSSKGKGNLKCDPSLEKFRANGETDGTSINGRSKLSSRLIKFSNEESTCPFNFEDICLKLVTNDSNKELVREIGLIGSDGIPSFVPSISPFVSDYIPLSAQKDDRVVGGASLASESQVCQGNMDGAGDHKSGISTERLASNESNNAGKSNKSSLGVQRDGKFSFCSPASDMGVDGCCVVPSSSLRPLVGKVSHILRQLKINILDMDAALLNVALRSSKAQSDRRQAWRAFVKSAETIYEMVQATITLEDMIKTEYLRNDWWYWSSFSAAAKSSTLPSLALRIYSLDSAIIYEKMPNSSLTDSSEHSAIVEQKLPIAVDAEKSKASRKSNRKRKEPDG* | 2216 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops5g01234 | 2215 | ProSiteProfiles | Methyl-CpG-binding domain (MBD) profile. | 235 | 302 | IPR001739 | GO:0003677 | |
Rops5g01234 | 2215 | ProSiteProfiles | Zinc finger PHD-type profile. | 1274 | 1324 | IPR019787 | - | |
Rops5g01234 | 2215 | Pfam | WSTF, HB1, Itc1p, MBD9 motif 1 | 1356 | 1400 | IPR028942 | - | |
Rops5g01234 | 2215 | ProSiteProfiles | Zinc finger PHD-type profile. | 77 | 130 | IPR019787 | - | |
Rops5g01234 | 2215 | Pfam | Methyl-CpG binding domain | 236 | 289 | IPR001739 | GO:0003677 | |
Rops5g01234 | 2215 | Pfam | Bromodomain | 1165 | 1220 | IPR001487 | GO:0005515 | |
Rops5g01234 | 2215 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Rops5g01234 | 2215 | ProSiteProfiles | Bromodomain profile. | 1167 | 1215 | IPR001487 | GO:0005515 | |
Rops5g01234 | 2215 | SUPERFAMILY | Bromodomain | 1111 | 1229 | IPR036427 | GO:0005515 | |
Rops5g01234 | 2215 | ProSiteProfiles | FYR domain FYRN motif profile. | 379 | 432 | IPR003888 | GO:0005634 | |
Rops5g01234 | 2215 | SUPERFAMILY | FYVE/PHD zinc finger | 1262 | 1326 | IPR011011 | - | |
Rops5g01234 | 2215 | PANTHER | OS02G0192300 PROTEIN | 21 | 2211 | - | - | |
Rops5g01234 | 2215 | MobiDBLite | consensus disorder prediction | 148 | 170 | - | - | |
Rops5g01234 | 2215 | Pfam | PHD-finger | 80 | 128 | IPR019787 | - | |
Rops5g01234 | 2215 | Pfam | PHD-finger | 1276 | 1322 | IPR019787 | - | |
Rops5g01234 | 2215 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 74 | 129 | IPR013083 | - | |
Rops5g01234 | 2215 | ProSitePatterns | Zinc finger PHD-type signature. | 80 | 127 | IPR019786 | - | |
Rops5g01234 | 2215 | SUPERFAMILY | FYVE/PHD zinc finger | 78 | 138 | IPR011011 | - | |
Rops5g01234 | 2215 | MobiDBLite | consensus disorder prediction | 1532 | 1562 | - | - | |
Rops5g01234 | 2215 | Gene3D | - | 1117 | 1239 | IPR036427 | GO:0005515 | |
Rops5g01234 | 2215 | ProSitePatterns | Zinc finger PHD-type signature. | 1277 | 1321 | IPR019786 | - | |
Rops5g01234 | 2215 | SMART | PHD_3 | 1276 | 1322 | IPR001965 | - | |
Rops5g01234 | 2215 | SMART | PHD_3 | 79 | 128 | IPR001965 | - | |
Rops5g01234 | 2215 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1263 | 1341 | IPR013083 | - | |
Rops5g01234 | 2215 | CDD | PHD1_Lid2p_like | 1276 | 1321 | - | - | |
Rops5g01234 | 2215 | Gene3D | - | 380 | 490 | - | - | |
Rops5g01234 | 2215 | SUPERFAMILY | DNA-binding domain | 235 | 288 | IPR016177 | GO:0003677 |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops5g01234 | 1 | 2215 | C2H2 Transcription Factor Family | AT3G01460 | 45.088 | 0.0 | 1744 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | PHD | Rops5g01234 | Bromodomain | 3.4e-05 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops5g01234 | K22768 | - | gmx:100820223 | 3397.06 |