Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01211 ATGGAGTCTTCTTCTTCCAAGGGCAACAACAACATTGGTTCTAGAGATTTCTCCTTTCATGTTGAGGCTGCACCACCACAACCCAGCCCGCTGATTAAGATGATCGCGGTGGCTACCATCGCCGCCGGGATACAATTCGGGTGGGCCCTACAGTTATCCTTGTTGACTCCATATGTTCAGCTGCTGGGGGTCCCACACAAGTGGGCCGCCTTCATCTGGCTCTGTGGGCCTGTTTCCGGACTCGTCGTTCAGCCTATAGTTGGCTTCTATAGCGACCGATGCACCTCCCGTTTCGGTCGCAGACGTCCTTTTATCCTCTCCGGTGCCATTGCCGTCGCCATAGCTGTCTTCCTAATCGGCTACGCCGCCGATTTAGGACACTCCTTCGGCGACGATATAACCAAAAAAACCCGTCCACGCGCCGTCGCCATCTTCGTCGTAGGTTTCTGGATCCTCGACGTCGCTAACAACATGCTCCAAGGACCCTGCCGTGCATTCCTCGGCGACCTCTCCGCCGGCGACCACCGCAAAACAAGAACCGCCAATGCTTTCTTCTCATTCTTCATGGCCGTCGGTAACATCCTCGGCTACGCCGCGGGTTCGTTCAAGAATCTCCACCGTGCTTTCCCTTTCACTGAAACAAAAGCCTGTGATATCTTCTGTGCAAATCTCAAAAGCTGTTTCTTCTTCTCAATAACCCTCCTTCTCGTTCTCACTATTTTCGCTTTGTGTTACGTGAAAGACGTTCCCATCTCTTCGGGTCATGATAGCAGCAACGACGACGACGTTTCACAGGTTACGTGTTTCGGTGACTTATACGGTGCGTTTAAGGGATTGAAGAAACCTATGTGGATGCTGTTTTTGGTAACCGCTCTTAACTGGTTTGCATGGTTCCCTTATGTGTTGTTCGACACTGATTGGATGGGTCGTGAGGTTTATGGTGGTGACACTGGAACGACGTCGTATGATGCTGGCGTGCGTGCTGGTTCATTGGGATTAATGATTAACTCAGTGGTGCTTGGTTTTATGTCGTTGGGTGTTGAACCATTGGGTCATTTTGTTGGTGGAGCAAAAAGGCTTTGGGGTATTGTTAATTTCATTCTAGCTATTTGTTTGGCAATGACGGTGGTCATTACCAAGGTGGCGGAACACGAGCGCCATGTCAGCATCACCGCCGTGGGGGCACCGTCCAGCGGTGTGAAGGCCGGTGCTTTTATTTTCTTCGCGGTTCTGGGAATCCCTCTTGCGATTACTTACAGCGTTCCCTTTGCCCTGGCATCTATATACTCCAGCACTACAGGAGCAGGCCAAGGTTTATCTTTGGGACTCCTCAATATTGCAATTGTCATTCCACAGATGCTGGTATCGGCAATAAGTGGACCATGGGATGATTTGTTTGGTGGTGGCAACTTGCCGGCGTTCGTGTTAGGTGCGGTGGTAGCCGCTGTCAGTGCCGTGTTAGCAATTGTCTTGCTGCCTACACCAAAGCCAGCTGAAGTAGCCAATGTTTCAATCGCTACCGCTGGCGGTTTGCATTAA 1539 0.5107 MESSSSKGNNNIGSRDFSFHVEAAPPQPSPLIKMIAVATIAAGIQFGWALQLSLLTPYVQLLGVPHKWAAFIWLCGPVSGLVVQPIVGFYSDRCTSRFGRRRPFILSGAIAVAIAVFLIGYAADLGHSFGDDITKKTRPRAVAIFVVGFWILDVANNMLQGPCRAFLGDLSAGDHRKTRTANAFFSFFMAVGNILGYAAGSFKNLHRAFPFTETKACDIFCANLKSCFFFSITLLLVLTIFALCYVKDVPISSGHDSSNDDDVSQVTCFGDLYGAFKGLKKPMWMLFLVTALNWFAWFPYVLFDTDWMGREVYGGDTGTTSYDAGVRAGSLGLMINSVVLGFMSLGVEPLGHFVGGAKRLWGIVNFILAICLAMTVVITKVAEHERHVSITAVGAPSSGVKAGAFIFFAVLGIPLAITYSVPFALASIYSSTTGAGQGLSLGLLNIAIVIPQMLVSAISGPWDDLFGGGNLPAFVLGAVVAAVSAVLAIVLLPTPKPAEVANVSIATAGGLH* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01211 512 Pfam MFS/sugar transport protein 40 296 - -
Rops5g01211 512 CDD MFS_SLC45_SUC 34 471 - -
Rops5g01211 512 NCBIfam sucrose/proton symporter 30 496 IPR005989 GO:0005886|GO:0008515|GO:0015770
Rops5g01211 512 PANTHER SUGAR TRANSPORTER 31 491 - -
Rops5g01211 512 FunFam Sucrose transport protein 28 492 - -
Rops5g01211 512 Gene3D MFS general substrate transporter like domains 32 492 IPR036259 -
Rops5g01211 512 SUPERFAMILY MFS general substrate transporter 34 498 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01211 Rops-Chr5 25893770 25897308 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01211 27 497 Sucrose Transporter Gene Family AT1G22710 67.782 0.0 680
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01211 K15378 - gmx:100782007 746.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g01211 5 25893770 25897308 Rops5g01211 5 25893770 25897308 ECH