Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01209 ATGGTTAGGGAGCCCAAAAACGCGACTCTTGGTCCTGCTGTCAGAGACGGTGAACATGTTTTTGGTGTGGCTTGCATCTTTGCATCATTTAATGACACCTTCATTCATGTGACTGATTTGTCTGGGAGGGAAACACAAGATGTTGCTGCCAGATGCAAGGAGCTGGGCCTAACTGCTCTTCATATCAAGCTCCGTGCAACTGGAGGACACAAGCCGAAAACACCTGGCCCTGGTGCTCAGTCTGCTCTCCGTGCCTTGGCTCGGTCAGGAATGAAAGCTGGTCGCATAGAGGATGTGACTCCAATTCCTTCGGATAGCACTCGTAGAAAGAGTGGTAGAAGGGGTAGGAGGCTTTGA 357 0.507 MVREPKNATLGPAVRDGEHVFGVACIFASFNDTFIHVTDLSGRETQDVAARCKELGLTALHIKLRATGGHKPKTPGPGAQSALRALARSGMKAGRIEDVTPIPSDSTRRKSGRRGRRL* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01209 118 Gene3D Ribosomal protein S11 10 45 IPR036967 GO:0003735|GO:0005840|GO:0006412
Rops5g01209 118 FunFam 40S ribosomal protein S14 44 118 - -
Rops5g01209 118 Gene3D Ribosomal protein S11 46 118 IPR036967 GO:0003735|GO:0005840|GO:0006412
Rops5g01209 118 SUPERFAMILY Translational machinery components 17 116 - -
Rops5g01209 118 MobiDBLite consensus disorder prediction 86 118 - -
Rops5g01209 118 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 46 111 IPR001971 GO:0003735|GO:0005840|GO:0006412
Rops5g01209 118 Pfam Ribosomal protein S11 45 114 IPR001971 GO:0003735|GO:0005840|GO:0006412
Rops5g01209 118 PIRSF RPS11p_RPS11a_RPS14e_RPS11o 43 116 IPR001971 GO:0003735|GO:0005840|GO:0006412
Rops5g01209 118 PIRSF RPS11p_RPS11a_RPS14e_RPS11o 2 47 IPR001971 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01209 Rops-Chr5 25849736 25850092 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01209 3 107 Cytoplasmic Ribosomal Protein Gene Family AT3G52580 67.669 3.32e-57 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01209 K02955 - gmx:100787077 175.637