Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01206 ATGGCGACTTCATCTCCCACCAAAAGCAACAACGTTGACACTAGAGTGTCCTTCCTTAATGTAGAAGAAGCAGCACAACAACAGTCCAGCCCTCTCCGTAAGATGATTGCTGTGGCATCCATCGCCACTGGCATTCAATTCACGTGGGCCTTACAGTTATCCTTGCTGAACCCATATGTCCAACTGCTCGGCATCAACCACACTGTATCAGCCTTTATTTGGCTCTGTGGCCCAATCTCCGGCATTGTCGTTCAGCCCATCGTTGGTTACTACAGTGACCGATGCACCTCCCGTTTCGGTCGCCGCCGTCCCTTCATCCTCTCCGGCGCCATCGCTATCTCCGTCGCCGTCTTCCTCATTGGCTACGCCCCCGACCTTGGACACTCGTTCGGAGACGACATCACCAAGAAAACCCACCCACGCGCCGTCACCATCTTCGGTATTGGCTTCTGCATCCTCGTCGTAGCCAGCAACATGTTCCAAGGACCATGCCACGCTTTCCTCGCCGACCTTGCCGCCGGTGACCAAAGCAAAACGAGAACCGGCAACGCTCTCTTCTCCTTCTTCATGGCTGTGGGGAATATCCTTGGCTATGTCGTTGGCTCTTATAACGGCCTTCACCACATCTTCCCCTTTTCCGAGACAAAAGCTTGCAATGTTTCCTGTGCTAACTTGAAGACCTGTTTCATTTTCTCAATTATTCTCCTCCTTGTTCTCACAATAACTACACTCATTTTAGTGAATGATCCTCAGATTACAAATGAGTCACCCATTTATTGCTTTGGGCAGTTCCTCGGTGCGTTGAAGGAACTCAAGAAGCCGATGTGGATGCTGATGCTTGTTACAGCTATCAACTGGATGGCGTGGTTCCCTTACTTGTTGTTTGACACTGATTGGATGGGTCATGAGGTATATGGTGGTAACGCTGGAGATAAGTCTTATGACAGTGGCGTGCATACTGGGGCGTTGGGACTCATACTCAACTCAGTGGTGATTGGTTTGATGTCTTTGGCAGTGGAGCCTTTGGGGCGTTTACTTGGTGGAGTCAAGAAGCTGTGGGGTATCGTTAACTTCATTCTGGCAATTTGCATGACTATGATGGTACTCATCTCTAAGGTCGCAGAGCACGACCGTGAAGTCAACCCGGACGGTGTGAAGACTGGAGCCTTGATTCTTTTTGTGGTTCTTGGAATCCCTCTAGCGGTTACTTACAGTGTCCCTTTCGCTCTAGCATCAATATACTCTGCGGCTTCAGGGGCAGGCCAAGGTTTATCTCAGGGAGTACTGAATCTTTCAATTGTCATTCCACAGATGGTGGTGTCGTCATTAATTGGACATTGGGATGCTTTGTTTGGTGGTGGCAACATGCCAGCTTTCGCGGTGGGTGCAGTGGCGGCTGCCATCAGTGCCATATTGGCAATGGTTTTGCTACCCACTCCAAAGCCATCTGTCGTGGCGAACGCTTCCTCTTTCACCTCAGGCAGCTTCCATTTATGA 1497 0.5023 MATSSPTKSNNVDTRVSFLNVEEAAQQQSSPLRKMIAVASIATGIQFTWALQLSLLNPYVQLLGINHTVSAFIWLCGPISGIVVQPIVGYYSDRCTSRFGRRRPFILSGAIAISVAVFLIGYAPDLGHSFGDDITKKTHPRAVTIFGIGFCILVVASNMFQGPCHAFLADLAAGDQSKTRTGNALFSFFMAVGNILGYVVGSYNGLHHIFPFSETKACNVSCANLKTCFIFSIILLLVLTITTLILVNDPQITNESPIYCFGQFLGALKELKKPMWMLMLVTAINWMAWFPYLLFDTDWMGHEVYGGNAGDKSYDSGVHTGALGLILNSVVIGLMSLAVEPLGRLLGGVKKLWGIVNFILAICMTMMVLISKVAEHDREVNPDGVKTGALILFVVLGIPLAVTYSVPFALASIYSAASGAGQGLSQGVLNLSIVIPQMVVSSLIGHWDALFGGGNMPAFAVGAVAAAISAILAMVLLPTPKPSVVANASSFTSGSFHL* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01206 498 PANTHER SUGAR TRANSPORTER 30 476 - -
Rops5g01206 498 SUPERFAMILY MFS general substrate transporter 34 482 IPR036259 -
Rops5g01206 498 NCBIfam sucrose/proton symporter 31 481 IPR005989 GO:0005886|GO:0008515|GO:0015770
Rops5g01206 498 CDD MFS_SLC45_SUC 35 455 - -
Rops5g01206 498 Pfam MFS/sugar transport protein 39 411 - -
Rops5g01206 498 Gene3D MFS general substrate transporter like domains 28 482 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01206 Rops-Chr5 25812930 25815768 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01206 17 486 Sucrose Transporter Gene Family AT1G22710 59.878 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01206 K15378 - gmx:100784153 656.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g01206 5 25812930 25815768 Rops5g01206 5 25812930 25815768 ECH