Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01198 ATGGCGACTTCATCTCCCACTAAAAGCAATAACAATAACCTTGATACCAAAGTCTCCTCCTCCTCCCTTAATGTAGAAGCTGCACAACCACAATCTAGTCCCATCCGAAAGATGATCGCGGTGGCGTCCATCGCCGCTGGGATCCAATTCGGATGGGCCTTACAGTTGTCCTTGCTAACCCCATATGTTCAGCTCCTTGGTGTCCCTCACGCTGCGGCGTCGTTTATTTGGTTATGTGGTCCGATTTCTGGCCTTGTTGTTCAACCCATCGTTGGTTATTATAGTGACCGAACCACCTCAAAGTTCGGTCGCCGTCGTCCCTTCATCTTCTCCGGTGCTATTGCTGTTGCCATTGCTGTCTTCCTTATTGGTTACGCCGCCGATTTAGGACACTCTTTTGGCGATGATATCACGAAGAAAACCCGGCCACGCGCCGTGATTATCTTCGTTGTCGGATTCTGGATCCTCGATGTAGCAAACAACATGCTTCAGGGACCCTGCAGGGCCTTCTTGGCTGATCTCGCCGCCGGTGATGAACGAAGAACGAGAACCGGGAATGCTTTGTTCTCGTTCTTCATGGCTGTGGGTCAGATCCTTGGTTATGCGGCTGGTTCATACAATGGACTTCACAAAATCTTCCCCTTTTCAGAAACCCCAGCTTGCAATGTTTTCTGTGCTAACTTGAAGAGCTGTTTCTTTTTCTCAATCTTTTTCCTTCTTGTCCTCGTCATCGTCACTCTCATTTACGTGAAGGATCCTCAGTTTATCAAGAACGAGGAAAACGAGGAGTCGCAGGTTTCATGCTTCGGGGAATTGTTCGGTGCTTTTAAGGAACTTAAGAAGCCTATGTGGATGTTGATGCTTGTGACAGCTATTAACTGGATCGCGTGGTTCCCTTACTTCTTGTTCGACACTGATTGGATGGGTCGTGAGGTTTATGGTGGTGAGACTGGTGATGATGCTTATGCAACTGGTGTCCATAATGGTTCCTTGGGACTCATGCTTAACTCGGTTGTTCTTGGTGCGATGTCTTTGGCCGTTGAGCCTTTGGCACGTTTGCTTGGTGGTGTGAAGAGGTTGTGGGGTATTGTTAACTTTATTCTTGCTATTTCCTTGGCAATGACTGTGTTGATTACCAAGATGGCTGAGCATGAGCGACAACTCAACCCTGCTGCTGTTGGGCACCCTTCCAATGGTGTCAAGGCTGGTGCTTTGAGTTTCTTCGCTGTTTTGGGAGTTCCTCTTGCGATTACTTACAGTGTCCCATTCGCTCTCGCATCAATCTATTCCGCCGCTTCAGGGGCTGGTCAAGGTTTATCTTTGGGAGTATTGAATCTTGCAATTGTGATTCCACAGATGGTGGTGTCGGCCTTAAGTGGACCTTGGGATGCTTTGTTTGGTGGTGGCAACTTGCCAGCTTTCGTGGTGGGTGCTGTGATGGCTGCCATTAGTGCCATATTGGCAATGGTTTTGCTACCCAATCCAAAACCAGCTGACATGGCTAAAGTTTCTCTCACCTCAGGCAGTTTCCACTGA 1536 0.4844 MATSSPTKSNNNNLDTKVSSSSLNVEAAQPQSSPIRKMIAVASIAAGIQFGWALQLSLLTPYVQLLGVPHAAASFIWLCGPISGLVVQPIVGYYSDRTTSKFGRRRPFIFSGAIAVAIAVFLIGYAADLGHSFGDDITKKTRPRAVIIFVVGFWILDVANNMLQGPCRAFLADLAAGDERRTRTGNALFSFFMAVGQILGYAAGSYNGLHKIFPFSETPACNVFCANLKSCFFFSIFFLLVLVIVTLIYVKDPQFIKNEENEESQVSCFGELFGAFKELKKPMWMLMLVTAINWIAWFPYFLFDTDWMGREVYGGETGDDAYATGVHNGSLGLMLNSVVLGAMSLAVEPLARLLGGVKRLWGIVNFILAISLAMTVLITKMAEHERQLNPAAVGHPSNGVKAGALSFFAVLGVPLAITYSVPFALASIYSAASGAGQGLSLGVLNLAIVIPQMVVSALSGPWDALFGGGNLPAFVVGAVMAAISAILAMVLLPNPKPADMAKVSLTSGSFH* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01198 511 CDD MFS_SLC45_SUC 38 488 - -
Rops5g01198 511 PANTHER SUGAR TRANSPORTER 34 491 - -
Rops5g01198 511 FunFam Sucrose transport protein 32 492 - -
Rops5g01198 511 Gene3D MFS general substrate transporter like domains 32 492 IPR036259 -
Rops5g01198 511 MobiDBLite consensus disorder prediction 1 25 - -
Rops5g01198 511 NCBIfam sucrose/proton symporter 34 496 IPR005989 GO:0005886|GO:0008515|GO:0015770
Rops5g01198 511 Pfam MFS/sugar transport protein 41 300 - -
Rops5g01198 511 SUPERFAMILY MFS general substrate transporter 37 498 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01198 Rops-Chr5 25692954 25695890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01198 9 497 Sucrose Transporter Gene Family AT1G71890 63.581 0.0 653
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01198 K15378 - gmx:100784153 766.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g01198 5 25692954 25695890 Rops6g02518 6 45610477 45613485 PCT