Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01190 ATGGTTGGTATTATCTACAATGGTGGTGTTCCTGTAATTTGGACCGCCGGCGGTGGTGCCTCGGTGGATTCCGGTGGCTCATTCAGATTTCTCTTGACTGGCAGCCTGCAACTTGTTAACGGCTCTGGTGCCACAGTTTGGGACTCAGGAACTTCCAATCTTGGTGTCTCCTCTGCCATACTTGATGACCAAGGCAACTTGGTTCTCTCCAATGGCACTGCCACTGTGTGGTCTAGCTTCAACTACCCCACTGATACCATTGTGCAGTCTCAGAACTTCACTCCTGATATGGTTTTACAATCTGGATTGTATTCATTTAGGTTCCAAACTTTAGATAATCTCATTCTTAGATGGAATGAAAGTGTTGTGTATTGGAATCATGGCTTGAATGGTTCAAGAAATGGGACTTTAACTTCACCTGTGTTGGGATTGCAGCCCATTGGGATGCTATCTATTCATGATCAAAATTTTCCAGGTGAAGCCATTGTTGCTTATAGCAGTGACTATGCAGAAGGAAGTGATGTTCTGAGAATTTTGAAGTTGGATGGTGATGGGAATTTGAGGATTTATAGTTTTTATAAAGGAAGTGGAACTGCAATAATAAGATGGGCTGCTGTGGAAGATCAATGTGAGGTTTTTGGATACTGTGGAGCTTATGGTATTTGTAGTTACAAGGATTCAGTTCCTATTTGTGAATGTCCATCTCAGAATTTTGAGATGATTGATCCAAATAATAGCAGGGAAGGGTGTAGGAGGAAGATGAAGCTAGAGGAATGTCCAGGAAAGGAGGGTATGTTGCAATTGGACAATGCTAGACTCTTGACTTATCCTCCTCAATTATTGATTAACCCTGAGGTGTTGTATGTTCCTAGATCACCTTGTAGAGGAAATTGTCTAGCAATTGATTCTTGTTTTGCTTCTACTTCCTTGTCAGATGGAACAGGATTTTGTTACCAAAAGACAACAAATTTTATTAGTGGTTATCAGAGTCCAGCTGAACTCAGCACTTCATTTATCAAGGTATGTCTACCACTGGCTCCAAACCCACCAGCAGGTCCTGGGAAGGAAAAGGAATGGAGAATGCATGCTTGGGTTATTTTTGTACTTGTATTAGGTACCCTTTTAGCTTTGATTGCTTTTCAAGGTGGTTTATGGTTCTGGTGTTGTAGAAACCGCACAAGATTTGAAGGATTGTATGGTCAGTATGCTCTCTTGGAGTATGCTTCTGGTGCACTAGTTAGGTTTCCATACAAGGAACTCCAAGGCTTGACAAAAAGGTTTAAGGATAAGCTTGGGGTTGGGAGATTTGGTTCTGTTTATAGAGGAATGCTTGATAATGGAATTGTTGTTGTAGTTAAGCAACTTGAGGGAATTGAACCAGAAGAGGAACAATTTAAGTTGGTAACTACTACCATATGTAGTACTCATCATATGAATTTGGTGAGACTGATTGGATTTTGCTCTGAAGGGCAACACAAGCTCTTGGTATATGAGTACATGAAAAATGGGTCTCTTGATAAATTTCTTTTTGTGAAAGAAGAACAATCAGGAACTTTGTTGGATTGGGAGTCTCGGTTCAACATTGCTCTGGGATCTGCAAGAGGTATCATGTACCTTCATGAAGAGTGTCCTAACTGCATAGTCCATTGTAATATAAAACCTGAAAACATTCTTTTAGATGAGAATTTCAAGCCCAAACTCTCAGATTTTTGCCTTGAAAAGCTCATGGGTCTTGAGGAGCACAGGTACCAAACCTTGTTACATATGAGAGGAACCAAAGGATATGTAGCTCCAGAATGGCTTTCAAATCTTTTAGTAACTTCAAAATCAGATGTATACAGCTATGGCATGGTTTTGCTGGAGATAGTGAGTGGAAGGAGAAACTTTGAAATCTCAGAAGAGACCAATAATAAAGAGTTCTCAGTTTGGGCCTATGAAGAGTTTGAGAAAGGTAATATTATGGGCATTGTTGACAAAAGACTACATGAACATGCAGTTAATTTGGATCAAGTGAAAATATTGCTTCATGCAAGCTTTTGGTGCATTCAGGAGCAACCATCTCAGAGGCCAGCTATTAGCAAAGTCTTGCAAATGCTAGAAGGTGTTACAAAATGTAAGAAGCCACCAGCACCAAACTCCATGAATAAAGGACCATTCAGTGGAAATGGGGAATGCAATATCCCAACCCCAGTACCAAATTTCTATTCCTCTTCATTTCATCATTCCAGATAA 2232 0.4028 MVGIIYNGGVPVIWTAGGGASVDSGGSFRFLLTGSLQLVNGSGATVWDSGTSNLGVSSAILDDQGNLVLSNGTATVWSSFNYPTDTIVQSQNFTPDMVLQSGLYSFRFQTLDNLILRWNESVVYWNHGLNGSRNGTLTSPVLGLQPIGMLSIHDQNFPGEAIVAYSSDYAEGSDVLRILKLDGDGNLRIYSFYKGSGTAIIRWAAVEDQCEVFGYCGAYGICSYKDSVPICECPSQNFEMIDPNNSREGCRRKMKLEECPGKEGMLQLDNARLLTYPPQLLINPEVLYVPRSPCRGNCLAIDSCFASTSLSDGTGFCYQKTTNFISGYQSPAELSTSFIKVCLPLAPNPPAGPGKEKEWRMHAWVIFVLVLGTLLALIAFQGGLWFWCCRNRTRFEGLYGQYALLEYASGALVRFPYKELQGLTKRFKDKLGVGRFGSVYRGMLDNGIVVVVKQLEGIEPEEEQFKLVTTTICSTHHMNLVRLIGFCSEGQHKLLVYEYMKNGSLDKFLFVKEEQSGTLLDWESRFNIALGSARGIMYLHEECPNCIVHCNIKPENILLDENFKPKLSDFCLEKLMGLEEHRYQTLLHMRGTKGYVAPEWLSNLLVTSKSDVYSYGMVLLEIVSGRRNFEISEETNNKEFSVWAYEEFEKGNIMGIVDKRLHEHAVNLDQVKILLHASFWCIQEQPSQRPAISKVLQMLEGVTKCKKPPAPNSMNKGPFSGNGECNIPTPVPNFYSSSFHHSR* 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01190 743 Gene3D - 3 82 IPR036426 -
Rops5g01190 743 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 82 205 - -
Rops5g01190 743 SUPERFAMILY alpha-D-mannose-specific plant lectins 3 129 IPR036426 -
Rops5g01190 743 PANTHER OS07G0415500 PROTEIN 4 711 - -
Rops5g01190 743 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 500 709 - -
Rops5g01190 743 Gene3D Phosphorylase Kinase; domain 1 399 499 - -
Rops5g01190 743 Gene3D Transferase(Phosphotransferase) domain 1 500 715 - -
Rops5g01190 743 Pfam S-locus glycoprotein domain 161 234 IPR000858 GO:0048544
Rops5g01190 743 Pfam Protein kinase domain 428 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g01190 743 FunFam S-receptor-like serine/threonine-protein kinase 400 499 - -
Rops5g01190 743 Gene3D - 83 205 IPR036426 -
Rops5g01190 743 ProSiteProfiles Bulb-type lectin domain profile. 1 82 IPR001480 -
Rops5g01190 743 PIRSF SRK 1 722 IPR024171 GO:0004674
Rops5g01190 743 ProSitePatterns Protein kinases ATP-binding region signature. 431 453 IPR017441 GO:0005524
Rops5g01190 743 CDD STKc_IRAK 431 701 - -
Rops5g01190 743 ProSiteProfiles Protein kinase domain profile. 425 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g01190 743 SUPERFAMILY Protein kinase-like (PK-like) 409 700 IPR011009 -
Rops5g01190 743 Pfam D-mannose binding lectin 12 96 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01190 Rops-Chr5 25359210 25361441 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01190 408 711 Receptor kinase-like Gene Family AT5G38280 41.987 6.08e-66 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Rops5g01190 Pkinase 3.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01190 - - gmx:100810753 957.977