Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01189 ATGGTTGGTATTATCTACAATGGTGGTGTTCCTGAAATTTGGACCGCCGGCGGTGGTGCCTCGGTGGATTCCGGTGGCTCATTCAGATTTCTCTCGACTGGCAGCCTGCAACTTGTTAACGGCTCTGGTGCCACAGTTTGGGACTCAGGAACTTCCAATCTTGGTGTCTCCTCTGCCATACTTGATGACCAAGGCAACTTGGTTCTCTCCAATGGCACTGCCACTGTGTGGTCTAGCTTCAACTACCCCACTGATACCATTGTGCAGTCTCAGAACTTCACTCCTGATATGGTTTTACAATCTGGATTGTATTCATTTAGGTTCCAAACTTTAGATAATCTCATTCTTAGATGGAATGAAAGTGTTGTGTATTGGAATCATGGCTTGAATGGTTCAATAAATGGGACTTTAACTTCACCTGTGTTGGGATTGCAGCCCATTGGGATGCTATCTATTCATGATCAAAATTTGCCAAGTGAAGCCATTGTTGCTTATAGCAGTGACTATGCAGAAGGAAGTGAGGTTCTGAGAATTTTGAAGTTGGATGGTGATGGGAATTTGAGGATTTATAGTTTTTATAAAGGAAGTGGAACTGCAATAATAAGATGGGCTGCTGTGGAAGATCAATGTGAGGTATATGGATACTGTGGAGCTTATGGTATTTGTAGTTACAAGGATTCAGTTCCTATTTGTGAATGCCCATCTCAGAATTTTGAGATGATTGATCAAACTAATAGCAGGGAAGGGTGTAAGAGGAAGGTGAAGTTAGAGGATTGTCCAGGAAAGGAGGGTATGTTGCAATTGGACCACGCTAGACTCTTGACTTACCCTCCTCAATTCTTGATTAACCCTGAGGTGTTATATATTCCTAGATCACCTTGTAGAGGAATCTGTCTAGCAATTGATTCTTGTTTTGCTTCTACTTCCTTGTCAGATGGAACAGGATTTTGTTACCAAAAGACAACAAATTTTATTAGTGGTTATCAGAGTCCAGCTGAACTCAGCACTTCATTTATCAAGGTATGTCTACCACTGGCTCCAAACCCACCAGCAGGTCCTGGGAAGGAAAAGGAATGGAGAATGCATGCTTGGGTTATTTTTGTACTTGTATTAGGTTCCATTTTAGCTTTGATTGCTTTTCAAGGTGGTTTATGGTTCTGGTGTTGTAGAAACCGCACAAGATATGGAGGATTGTATGGTCAGTATGCTCTCTTGGAGTATGCTTCTGGTGCACTAGTTAGGTTTCCATACAAGGAACTCCAAGGCTTGACAAAAGGGTTTAAGGATAAGCTTGGGGTTGGGAGATTTGGTTCTGTTTATAGAGGAATGCTTGATAATGGAACTGTTGTTGCAGTTAAGCAACTTGAGGGAATTGAACCAGAAGAGGAACAATTTAAGTTGGTAACTACTACCATATGTAGTACTCATCATATGAATTTGGTGAGACTGATTGGATTTTGCTCTGAAGGGCAACACAAGCTCTTGGTATATGAGTACATGAAAAATGGGTCTCTTGATAAATTTCTTTTTGTGAAAGAAGAACAATCAGGAACTTTGTTGGATTGGGAGTCTCGGTTCAACATTGCTCTGGGATCTGCAAGAGGTATCATGTACCTTCATGAAGAGTGTCCTAACTGCATAGTCCATTGTAATATAAAACCTGAAAACATTCTTTTAGATGAGAATTTCAAGCCCAAACTCTCAGATTTTTGCCTTGAAAAGCTAATGGGTCCTGAGGAGCACAGGTACCAAACCTTGTTACATATGAGAGGAACCAAAGGATATGTAGCTCCAGAATGGCTTTCAAATCTTTTAGTAACTTCAAAATCAGATGTATACAGCTATGGCATGGTTTTGCTGGAGATAGTGAGTGGAAGGAGAAACTTTGAAATCTCAGAAGAGACCAATAATAAAGAGTTCTCAGTTTGGGCCTATGAAGAGTTTGAGAAAGGTAATATTATGGGCATTATTGACAAAAGACTACATGAACATGAAGTTAATTTGGATCAAGTGAAAATATTACTTCATGCAAGCTTTTGGTGCATTCAGGAGCAACCATCTCAGAGGCCAGCTATTAGCAAAGTCTTGCAAATGCTAGAAGGTGTTACAAAATGTAAGAAGCCACCAGCACCAAACTCCATGAATAAAGGACCATTCAGTGGAAATGGGGAATGCAATATCCCAACCCCAGTAGCAAATTGCTATTCCTCTTCATTTCATCATTCCAGATAA 2232 0.405 MVGIIYNGGVPEIWTAGGGASVDSGGSFRFLSTGSLQLVNGSGATVWDSGTSNLGVSSAILDDQGNLVLSNGTATVWSSFNYPTDTIVQSQNFTPDMVLQSGLYSFRFQTLDNLILRWNESVVYWNHGLNGSINGTLTSPVLGLQPIGMLSIHDQNLPSEAIVAYSSDYAEGSEVLRILKLDGDGNLRIYSFYKGSGTAIIRWAAVEDQCEVYGYCGAYGICSYKDSVPICECPSQNFEMIDQTNSREGCKRKVKLEDCPGKEGMLQLDHARLLTYPPQFLINPEVLYIPRSPCRGICLAIDSCFASTSLSDGTGFCYQKTTNFISGYQSPAELSTSFIKVCLPLAPNPPAGPGKEKEWRMHAWVIFVLVLGSILALIAFQGGLWFWCCRNRTRYGGLYGQYALLEYASGALVRFPYKELQGLTKGFKDKLGVGRFGSVYRGMLDNGTVVAVKQLEGIEPEEEQFKLVTTTICSTHHMNLVRLIGFCSEGQHKLLVYEYMKNGSLDKFLFVKEEQSGTLLDWESRFNIALGSARGIMYLHEECPNCIVHCNIKPENILLDENFKPKLSDFCLEKLMGPEEHRYQTLLHMRGTKGYVAPEWLSNLLVTSKSDVYSYGMVLLEIVSGRRNFEISEETNNKEFSVWAYEEFEKGNIMGIIDKRLHEHEVNLDQVKILLHASFWCIQEQPSQRPAISKVLQMLEGVTKCKKPPAPNSMNKGPFSGNGECNIPTPVANCYSSSFHHSR* 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01189 743 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 82 205 - -
Rops5g01189 743 Pfam S-locus glycoprotein domain 170 234 IPR000858 GO:0048544
Rops5g01189 743 SUPERFAMILY alpha-D-mannose-specific plant lectins 3 129 IPR036426 -
Rops5g01189 743 Gene3D Phosphorylase Kinase; domain 1 400 499 - -
Rops5g01189 743 SUPERFAMILY Protein kinase-like (PK-like) 409 700 IPR011009 -
Rops5g01189 743 PANTHER OS07G0415500 PROTEIN 5 711 - -
Rops5g01189 743 Pfam D-mannose binding lectin 13 96 IPR001480 -
Rops5g01189 743 Pfam Protein kinase domain 428 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g01189 743 Gene3D - 3 81 IPR036426 -
Rops5g01189 743 Gene3D - 82 205 IPR036426 -
Rops5g01189 743 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 500 709 - -
Rops5g01189 743 Gene3D Transferase(Phosphotransferase) domain 1 500 715 - -
Rops5g01189 743 ProSitePatterns Protein kinases ATP-binding region signature. 431 453 IPR017441 GO:0005524
Rops5g01189 743 ProSiteProfiles Bulb-type lectin domain profile. 1 82 IPR001480 -
Rops5g01189 743 CDD STKc_IRAK 431 701 - -
Rops5g01189 743 ProSiteProfiles Protein kinase domain profile. 425 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g01189 743 PIRSF SRK 1 723 IPR024171 GO:0004674
Rops5g01189 743 FunFam S-receptor-like serine/threonine-protein kinase 401 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01189 Rops-Chr5 25351293 25353524 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01189 408 711 Receptor kinase-like Gene Family AT5G38280 42.628 5.58e-68 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Rops5g01189 Pkinase 7.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01189 - - gmx:100810753 972.615