Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01173 ATGAAAAACCTCAAAACTCTTATTATTAGAAATGGTCGTTTTTCCAAAGGTCCCGAACATCTTCCAAAAAGTTTAAGAGTCCTGGAATGGTGGAGATATCCATCGCCATCTTTACCATCTGATTTTCATCCAAAGAAACTTGAGATATTGGCGTTTCCCCATGTTGGCTTAAAGTCAATTGAGTTGCTCATGTCAAAGAAGTTGGTGAGTATGAGAGTTTTGAAGTTTGATGGTTGTCCGTATATAAAAGAGATACCTAATGTGTCTGGTGCTCCAAATTTGGAAGAATTATCATTTGCAAATTGTTGGAATTTAATTGAAATTCACAAATCAGTTGGATCCCTAAATAAACTTAAAATCTTGAATGCTCATGGTTGCAACAGGCTTAGGAGTTTTCCACCCATCAAGTTGACCTCTCTTGAAAAACTCAACCTTTCACATTGTAATTGTCTTGAGAGTTTTCCAGAAATATTAGGAAAGATGGAAAAGATAACCGTGCTTGATGTCATGAACACTTGCATAAAAGAACTGCCATTTTCAATTCATAATCTCACTCGGCTTCAAAGACTACGACTGAGATGCTGTGGAGTTGTTCGGTTGCCTAGTAGCATTTTGGCGATGCGAGAACTTAACGAGCTCTATGTTGGGGAATGTACATTACTATTACCTAAACAGGAAGAAGGTGAAGCACAAGGGAGCTCAATGATGTTTGAAAACACCATTAATCTTGGTCTTTCAGGCTGCAATATATCAGATGAATTCCTTCAAATAGGTCTTCCTTTGTTTGCCAATGTGAAAGAGTTAAACCTATCACGGAATCAATTTACAATTCTTCCTGCTTGCATCAAAGAATGTCGCTTCTTGACAAAAATTCATCTGGACAGTTGCCCAAATCTTCAAAAGATTGAAGGGATTCCACCCATCATAGAAACATTCTCTGCGACTTGTTGCGGATCATTGGGATCTTTAGACCTCACACTTCTTCCTGCATGCACCAAAGAATGTCGCTTTTTGAGGACACTTATTTTGGATGGTTGCCGGGAACTTCAAGAAATTAGAGGGATTCCACCCAACATAAGAACTTTGTCTGCAAAAGGCTGCCCAGTCTTGACTGATGAGTGTAGAAACATGTTACTGAATGAGGTTCTTGTTTTTTTACAAATTTGA 1167 0.383 MKNLKTLIIRNGRFSKGPEHLPKSLRVLEWWRYPSPSLPSDFHPKKLEILAFPHVGLKSIELLMSKKLVSMRVLKFDGCPYIKEIPNVSGAPNLEELSFANCWNLIEIHKSVGSLNKLKILNAHGCNRLRSFPPIKLTSLEKLNLSHCNCLESFPEILGKMEKITVLDVMNTCIKELPFSIHNLTRLQRLRLRCCGVVRLPSSILAMRELNELYVGECTLLLPKQEEGEAQGSSMMFENTINLGLSGCNISDEFLQIGLPLFANVKELNLSRNQFTILPACIKECRFLTKIHLDSCPNLQKIEGIPPIIETFSATCCGSLGSLDLTLLPACTKECRFLRTLILDGCRELQEIRGIPPNIRTLSAKGCPVLTDECRNMLLNEVLVFLQI* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01173 388 SUPERFAMILY L domain-like 2 316 - -
Rops5g01173 388 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 20 164 - -
Rops5g01173 388 SMART LRR_typ_2 184 207 IPR003591 -
Rops5g01173 388 SMART LRR_typ_2 262 285 IPR003591 -
Rops5g01173 388 SMART LRR_typ_2 137 161 IPR003591 -
Rops5g01173 388 Gene3D Ribonuclease Inhibitor 233 382 IPR032675 -
Rops5g01173 388 Gene3D Ribonuclease Inhibitor 132 224 IPR032675 -
Rops5g01173 388 Gene3D Ribonuclease Inhibitor 1 131 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01173 Rops-Chr5 24996169 24999248 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01173 14 221 WRKY Transcription Factor Family AT4G12020 34.101 9.02e-22 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01173 - - gmx:100804616 427.557