Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01121 ATGGAAGGGAAGGGAAGCACAAGGAGGGTAATTTGGTTGATGCACTTTGGAACTCAAAAGATTGGGTTATTGATGGTGATGTTTATATGTCATGAGGAAAACATTGTGGGGGGTTGTGATGGGTCAGTGCTGTTGGATGGGAGTCCAGGTGAGAGGGATCAGCCAGCTAACATTGGCATAAGAACTGAGGCATTGCAGACCATTGAGGACATCAGGGCACTTGTCCACAAAGAGTGTGGAAGGACCGTCTCTTGCGCTGATATCACTGTCTTGGCAGCTCGTGAAGCTGTTTTCCTATCAGGAGGTCCTGATTTTTCAGTTCCATTAGGAAGAAGAGATGGCATAACCTTTAACACAACAGGAACAAAAAACCTTCCATCACCCATTAACACCACCAATGCAACCCTCAATGCTTTTGCATCCAAAAACTTTGATGTCACAGATGTGGTTGCCTTATCAGGTGCACACACATTTGGTCGTGCCCATTGTGGCACATTTTTCAATAGGCTTTCTCCTATTGACCCCACCATGGACACAACTTTAGCAAAAAACCTCAAGGCCACTTGCCCAAATGCAAAGTCAAGCAACACTGCCAACCTTGACATCAAAACCCCAACAGTGTTCGATAACAAATACTACATTGACCTAATGAATCGCCAGGGTTTGTTCACCTCTGATCAAGACTTGTTCACAGATAAGAGGACAAACGGAATTGTAAATGCCTTTGCTACCAATCAGACCTTGTTCTTTGAGAAGTTTGTGAATGCTGTTGTAAAGTTAAGCCAATTGGATGTGTTGACAGGAAATAATCAAGGTGAAATTCGTGTCAGATGCAATGTGATAAATAATAAGAAATCTATGTTGGAATCTGTGGTGCAAGTGGTGGTACAATTAGCTGATCAATTGTAA 909 0.429 MEGKGSTRRVIWLMHFGTQKIGLLMVMFICHEENIVGGCDGSVLLDGSPGERDQPANIGIRTEALQTIEDIRALVHKECGRTVSCADITVLAAREAVFLSGGPDFSVPLGRRDGITFNTTGTKNLPSPINTTNATLNAFASKNFDVTDVVALSGAHTFGRAHCGTFFNRLSPIDPTMDTTLAKNLKATCPNAKSSNTANLDIKTPTVFDNKYYIDLMNRQGLFTSDQDLFTDKRTNGIVNAFATNQTLFFEKFVNAVVKLSQLDVLTGNNQGEIRVRCNVINNKKSMLESVVQVVVQLADQL* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01121 302 SUPERFAMILY Heme-dependent peroxidases 35 282 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops5g01121 302 Pfam Peroxidase 33 245 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g01121 302 CDD secretory_peroxidase 36 281 IPR033905 GO:0004601|GO:0042744
Rops5g01121 302 ProSiteProfiles Plant heme peroxidase family profile. 35 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g01121 302 PANTHER - 34 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01121 302 FunFam Peroxidase 126 260 - -
Rops5g01121 302 ProSitePatterns Peroxidases proximal heme-ligand signature. 148 158 IPR019793 -
Rops5g01121 302 Gene3D Peroxidase, domain 2 127 261 - -
Rops5g01121 302 PRINTS Plant peroxidase signature 199 214 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01121 302 PRINTS Plant peroxidase signature 82 92 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01121 302 PRINTS Plant peroxidase signature 215 232 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01121 302 PRINTS Plant peroxidase signature 25 45 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01121 302 PRINTS Plant peroxidase signature 101 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01121 302 PRINTS Plant peroxidase signature 255 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01121 302 PRINTS Plant peroxidase signature 147 159 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01121 302 PRINTS Plant peroxidase signature 63 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01121 302 Gene3D - 33 278 - -
Rops5g01121 302 PRINTS Haem peroxidase superfamily signature 148 163 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g01121 302 PRINTS Haem peroxidase superfamily signature 201 216 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g01121 302 PRINTS Haem peroxidase superfamily signature 83 100 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g01121 302 PRINTS Haem peroxidase superfamily signature 101 113 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01121 Rops-Chr5 23133811 23137790 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01121 21 298 Peroxidase AT1G71695 51.568 1.45e-95 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01121 K00430 - gmx:547550 426.017