Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01118 ATGGCTAAGGCTAGTGCTTCTTTCTACTCTTTGCTCTTTATTTCTTCCATTCTATTCACTTCACTCTGCCATGCCTTTGAGGCACAAGCCAAGCCTCCAGTAGTGAAGGGATTGTCCTTTTCTTTCTATTCCAAAACATGTCCCAAGCTTGAAACCATTGTGAGAAACCATCTCAATAATGTTTTCAAGCAGGACAATGGCCAAGCTCCTGGCTTGCTCCGCATCTTTTTCCATGATTGCTTTGTTCAGGGATGTGATGGGTCAGTGCTGTTGGATGGGAGTCCAGGTGAAAGGGAGCAACCAGCTAACATTGGCATCAGACCTGAGGCTTTGCAGACCATTGACGACATCAGGGCTGTTATCCACAATCAGTGTGGAAGGATCGTCTCTTGTGCTGACATCACTGTCTTGGCAGCTCGTGATGCTGTCTTCCTGTCAGGAGGCCCTGATTTTGCAGTTCCATTAGGAAGAAGAGATGGCATAACCTTTAGCACAACAGGAACAAGAAACCTTCCATCACCCATTGACACCACCAATGCAACCCTCAATGCTTTTGCATCCAAAAACTTTGATGTCACAGATGTGGTTGCCTTATCAGGTGCACACACATTTGGTCGTGCCCATTGTGGCACATTCTTCAATAGGCTTTCTCCTATTGACCCCAACATGGACAAAACCTTAGCCAAAAAGCTCAAGGACACTTGCCCAGATGCAACATCAAACCACACTGCTAACTTAGACATTAGAACTCCCTTCAAGTTCGATAATAAGTACTACCTTGACCTAATGAATCGCCAGGGTGTGTTCACCTCTGACCAAGACTTGTTCAATGATAAGAGGACAAAGGGATTGGTAAATTCCTTTGCCCTAGACCAGAACCTGTTTTTCACCAAGTTTGTGGATGCTGTTATAAGGTTGAGTCAATTGGATGTGTTGACAGGAAATCAAGGTGAAATTCGTGCTAAATGCAATGTGATAAATAATAAGAAATCTATATTGGAATCTATGGTGCAAGAGGTGGTACAATTAGCTGATCAGTTTTAA 1044 0.4377 MAKASASFYSLLFISSILFTSLCHAFEAQAKPPVVKGLSFSFYSKTCPKLETIVRNHLNNVFKQDNGQAPGLLRIFFHDCFVQGCDGSVLLDGSPGEREQPANIGIRPEALQTIDDIRAVIHNQCGRIVSCADITVLAARDAVFLSGGPDFAVPLGRRDGITFSTTGTRNLPSPIDTTNATLNAFASKNFDVTDVVALSGAHTFGRAHCGTFFNRLSPIDPNMDKTLAKKLKDTCPDATSNHTANLDIRTPFKFDNKYYLDLMNRQGVFTSDQDLFNDKRTKGLVNSFALDQNLFFTKFVDAVIRLSQLDVLTGNQGEIRAKCNVINNKKSILESMVQEVVQLADQF* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01118 347 SUPERFAMILY Heme-dependent peroxidases 33 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops5g01118 347 CDD secretory_peroxidase 37 326 IPR033905 GO:0004601|GO:0042744
Rops5g01118 347 FunFam Peroxidase 41 184 - -
Rops5g01118 347 Pfam Peroxidase 54 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g01118 347 ProSitePatterns Peroxidases proximal heme-ligand signature. 194 204 IPR019793 -
Rops5g01118 347 ProSiteProfiles Plant heme peroxidase family profile. 37 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g01118 347 Gene3D - 42 324 - -
Rops5g01118 347 PRINTS Haem peroxidase superfamily signature 129 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g01118 347 PRINTS Haem peroxidase superfamily signature 147 159 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g01118 347 PRINTS Haem peroxidase superfamily signature 69 83 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g01118 347 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g01118 347 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g01118 347 FunFam Peroxidase 172 306 - -
Rops5g01118 347 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01118 347 PRINTS Plant peroxidase signature 147 162 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01118 347 PRINTS Plant peroxidase signature 109 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01118 347 PRINTS Plant peroxidase signature 71 91 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01118 347 PRINTS Plant peroxidase signature 193 205 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01118 347 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01118 347 PRINTS Plant peroxidase signature 47 66 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01118 347 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01118 347 PRINTS Plant peroxidase signature 128 138 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01118 347 Gene3D Peroxidase, domain 2 173 307 - -
Rops5g01118 347 PANTHER - 27 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01118 347 ProSitePatterns Peroxidases active site signature. 69 80 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01118 Rops-Chr5 23105294 23109625 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01118 10 343 Peroxidase AT1G71695 51.754 3.53e-123 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01118 K00430 - gmx:547550 561.222