Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01110 ATGAATAATGAGATCCAGGAGGAAGGTGGAAGTAATAGGAAGGATAATATAAAGACTATAGAATTGAACAAGAAAATTTCTCCTTACAATGAGTCTGAGAAGCACATAAGACCAAAGGTTACCCCTTCAAATGATATAGTGATTACTACTGCAAATATTGGAGCATCGGAAGATATTAAAGAATCACTTCAAGAGGTGGTCATACTTCCTTTTAAAAGATCAGATTTATTCAAAGGCAGACTTCTAAATCTTTGTAGAGAGGCTACCCCAACTACTAATTTTGTTGATGAGGTGGATAGCATGCTTGGGCCATGGTTTAGAATTAAGGAGCATGTGGCAATGAGAAAGACCAAAAATGAATTCATATCCCACAAGGATGGGCTATTGTCAAAACCTAGTGAGCAAATTCTAGTTCTTGCTGCTACCAATAGGCCATTTGACTTTGATGAAACTATTATAAGACAGTTTCAATTCAAGATCATGGTTGGTCCTCAATCTGTTGAGAACAGAGAAATGATCTTGAAAACACTCCTAGCTAAGAAAATTTTTGCAAATATAGATTGCAGAGAGCTTTTAACTATGATAGAAGGATATACTGGAAGTGATCTTAAGAATTTGTGCATGATTGTAGTTTATTGA 639 0.3537 MNNEIQEEGGSNRKDNIKTIELNKKISPYNESEKHIRPKVTPSNDIVITTANIGASEDIKESLQEVVILPFKRSDLFKGRLLNLCREATPTTNFVDEVDSMLGPWFRIKEHVAMRKTKNEFISHKDGLLSKPSEQILVLAATNRPFDFDETIIRQFQFKIMVGPQSVENREMILKTLLAKKIFANIDCRELLTMIEGYTGSDLKNLCMIVVY* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01110 212 Gene3D - 165 208 - -
Rops5g01110 212 Pfam ATPase family associated with various cellular activities (AAA) 86 162 IPR003959 GO:0005524|GO:0016887
Rops5g01110 212 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 20 86 - -
Rops5g01110 212 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 210 IPR027417 -
Rops5g01110 212 Gene3D - 81 164 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01110 Rops-Chr5 22781142 22782317 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01110 81 207 Calmodulin-binding Proteins AT3G56690 32.331 2.52e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01110 - - gsj:114390914 218.394