Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01102 ATGGCAGCAGCAGTGGTGGGTGGAGCTTTCCTCTCTGCTTTCTTTGATGTTGTTTTGAACAGGCTGGCTTCACCTCAAGTTGCCAACTTGATCCGAGGAAAGAAGCTTGACCCCAAGTTGCTTCAAAGGTTGAAGACAACTCTCAAAGTGGTTGGAGCTGTGCTTAACGATGCTGAGAAGAAACAAATCACAGACTCTGATGTCAACAACTGGCTCAATGATCTCAAAGATGCTGTGTATGTGGCTGATGACTTATTGGATGAAGTTTCTACCAAAGCTGTCACTCAAAAGGAGGTGAGTAACTTCTTCTCTCGCCTTTTCAATGTGCAAGAGAGGGAGATGGTTAGTATGTTGGAAGAAATAGTTGTAAGACTAGAGAATATCTTAAAACACAAAGACAGTCTTTATCTCAAAGAGAATGCAATGGAGAACTTGTCAAATAGACTTCCATCAACATCTCTGCTAGATGATGGATCACGTACATATGGCAGGGACAAAGACAAGGAGGCCATAATCAAGTTGTTGTTAGATGATAATACTGATGGTGAACAAGTATCTGTGATCCCTATTGTGGGCATGGGTGGGGTAGGAAAGACCACTTTAGCTCAATTGGTGTATAATGATGACAATTTGAAGCAAAAATTTGATTTTAAAGCATGGGTTTGTGTTTCAGAAGAATTTGATATTCTGAGGGTTACAAAGGCTCTAATAGAGGCAATTGGAAAAACTCGTGAAATGAATGATCTAAATTTACTTCAGCAAGATTTGCTGGACAAGCTGAATGGAAAAAAGTTCTTAATTGTTTTGGATGATTTTTGGATGGAAGATTATGATACTTGGAATCTTCTTAAGAAACCTTTTCAACGTGGGATTAGGGTAAGTAAAATTCTTGTAACAACACGTAGTGAAAAGGTTGCTTCTATAGTCCAAACTGTTCAAACTTACCATCTAGATGAGTTGTCAGAAGAAGATTGTTGGTCAGTGTTTGCAAACCATGCATGTTTTTCCTCAATATCCAGTCGGAATGCAAAAACTCTGGAGAAAATTGGTAGGGAGATTGTTAGAAAGTGTAAGGGATTGCCTTTAGCAGCACGATCACTAGGAGGTATATTGCGAAATAATCATGATATAAGGGATTGGAATAATATACTGAATAGTGATACTTGGGAACTACCTGAAAGTAAGATTATTCCAGCATTGAGAGTCAGTTATCATTATCTCCCTCCACATTTAAAACGTTGCTTTGTTTATTGTTCAGTATATCCCAAAGACTATAAATTTGATAAAAATGATTTAATCTTGTTGTGGATGGCTGAAGATCTTTTACCAACATCAAATAAAGGAAAGACCTTAGAAGAAGTTGGTTCTGAGTATTTTGATTATTTGGTTTCAAGATCATTTCTTCAACGAACATGTGACTCTTTTGTAATGCATGATTTAATGCATGATTTAGCAATATTCCTCGGTGGAGATTTCTACTTCAGATCTGAAATATTAAAAAAAAAAAGCAAGATTAGTAGCAAGACTCGCCACTGGTCATTTCGCAAATTATTTACTTCAACCTTGGAAAACATTGAATTCTTTGATGAAGTAAAATTTCTGAGAACTTTCTTACCAAACCAGTGTTCTTTGATTTCATCCAACAATGAAATGGTGGCATCTATCATATTATCGAAGCTTAAGTACTTACGAGTTTTATCATTTCGTGAGTTCTTCAGGCTCGATGCATTGCCCAATTCAATAGGTGAATTGATCCATTTGCGGTATTTGGATCTCTCCCGCACAAGTATAATGGCATTGCCAGAGTCATTGTGTAAGTTGTACAATCTACAAACATTGAAGCTGTTTGGTTGTTCTAAGTTGACTATGCTACCTAGTGACATGCAAAATCTTGTAAACTTGCGTCATCTTGATATTGGTGATGATGTTGATGAAACTTATTTTGAGGAGATGCCCAAAGGAATGAGCAAATTAAACCAGTTGCAGCATTTACCTTACTTTGTTGTGGGCAGACACGAAGAGAATGGGATCAAGGAATTGGGAGGGCTTTCAAATCTTCATGGATCACTTGAAATTTTGAGCTTGGAGAATGTGACCAACAGCAGTGAGGCATTGGAGGCAAGAATAATGGACAAGAAGCACATTAACAATTTATCCTTGAAATGGACAAAGACAGGTGATGATTGTACTGATTCCCAAATTGAATTTGATATACTTTGCAAGTTACAGCCTCACCAAGACCTACAAGTGCTATCGATAAGTGGCTATAGGGGTACAAGATTTCCAGATTGGGTTGGAAATTCTTCCTACCATAATACGACAGATCTAACACTAGATGCTTGCAACAATTGTTGTATGATTCCTTCACTTGGACAACTACCATCTCTCAAGAATTTGAGTATTTCAAATTTCAATGTGCTAGAGACTATTGATGCTGGCTTTTACAAGAACGATGATTCTCCTCATGGGAAACCCTTTCTCTCCCTTGAATCTCTAGAATTTAAAAATATGGCTTGTTGGGAGGTGTGGAGTTCATTTGAGTCAGATGCTTTTTCTCAACTTAAACACTTAAGAATAAGTGGTTGTCCCAGATTAAGGGGAGCTTTGCCAAATCACCTTCCTGCTTTGGAAACACTTTCGATTACCGGATGCGAGCAGCTTGCCTCTTCTCTCCCATGGTCTCCTGCCATGTGCAAATTGAAGATACTTGAAAGCAATAAAGTAGCCTTGCAGTTACCTCCTTCGATAAAAGATTTAACAATCGAAGGAAACCCATTGGTGGCGGAGTCCGTGATTGAAGCCATCAATAGCTCCCAACTGACTTGTCTCCAATCTTTAAAATTACGTGATTGTTCATCTGTGATATTGTTTCCATGGAATTGTCTACCCACATCATTGGCGAATCTGGATATCCACAGTTATGATCATCTCACATCTCTCCCGTTGGAGAGCTTTCCAAATCTCGAAAGTCTCCAAATCGGATTTTCAGCAGATATGTTACTATGA 3006 0.3822 MAAAVVGGAFLSAFFDVVLNRLASPQVANLIRGKKLDPKLLQRLKTTLKVVGAVLNDAEKKQITDSDVNNWLNDLKDAVYVADDLLDEVSTKAVTQKEVSNFFSRLFNVQEREMVSMLEEIVVRLENILKHKDSLYLKENAMENLSNRLPSTSLLDDGSRTYGRDKDKEAIIKLLLDDNTDGEQVSVIPIVGMGGVGKTTLAQLVYNDDNLKQKFDFKAWVCVSEEFDILRVTKALIEAIGKTREMNDLNLLQQDLLDKLNGKKFLIVLDDFWMEDYDTWNLLKKPFQRGIRVSKILVTTRSEKVASIVQTVQTYHLDELSEEDCWSVFANHACFSSISSRNAKTLEKIGREIVRKCKGLPLAARSLGGILRNNHDIRDWNNILNSDTWELPESKIIPALRVSYHYLPPHLKRCFVYCSVYPKDYKFDKNDLILLWMAEDLLPTSNKGKTLEEVGSEYFDYLVSRSFLQRTCDSFVMHDLMHDLAIFLGGDFYFRSEILKKKSKISSKTRHWSFRKLFTSTLENIEFFDEVKFLRTFLPNQCSLISSNNEMVASIILSKLKYLRVLSFREFFRLDALPNSIGELIHLRYLDLSRTSIMALPESLCKLYNLQTLKLFGCSKLTMLPSDMQNLVNLRHLDIGDDVDETYFEEMPKGMSKLNQLQHLPYFVVGRHEENGIKELGGLSNLHGSLEILSLENVTNSSEALEARIMDKKHINNLSLKWTKTGDDCTDSQIEFDILCKLQPHQDLQVLSISGYRGTRFPDWVGNSSYHNTTDLTLDACNNCCMIPSLGQLPSLKNLSISNFNVLETIDAGFYKNDDSPHGKPFLSLESLEFKNMACWEVWSSFESDAFSQLKHLRISGCPRLRGALPNHLPALETLSITGCEQLASSLPWSPAMCKLKILESNKVALQLPPSIKDLTIEGNPLVAESVIEAINSSQLTCLQSLKLRDCSSVILFPWNCLPTSLANLDIHSYDHLTSLPLESFPNLESLQIGFSADMLL* 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01102 1001 Pfam NB-ARC domain 165 385 IPR002182 GO:0043531
Rops5g01102 1001 SUPERFAMILY L domain-like 476 990 - -
Rops5g01102 1001 FunFam Probable disease resistance protein At1g61300 147 313 - -
Rops5g01102 1001 Gene3D - 17 121 - -
Rops5g01102 1001 Pfam Rx N-terminal domain 10 98 IPR041118 -
Rops5g01102 1001 Gene3D Ribonuclease Inhibitor 524 935 IPR032675 -
Rops5g01102 1001 PRINTS Disease resistance protein signature 259 273 - -
Rops5g01102 1001 PRINTS Disease resistance protein signature 187 202 - -
Rops5g01102 1001 PRINTS Disease resistance protein signature 871 887 - -
Rops5g01102 1001 PRINTS Disease resistance protein signature 357 371 - -
Rops5g01102 1001 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 418 IPR027417 -
Rops5g01102 1001 Gene3D - 403 486 IPR036388 -
Rops5g01102 1001 Gene3D - 145 315 IPR027417 -
Rops5g01102 1001 Gene3D - 319 402 IPR042197 -
Rops5g01102 1001 PANTHER DISEASE RESISTANCE PROTEIN RP 41 884 IPR044974 GO:0006952
Rops5g01102 1001 FunFam Probable disease resistance protein At1g63360 404 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01102 Rops-Chr5 22672465 22676419 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01102 185 686 WRKY Transcription Factor Family AT5G45050 21.918 1.41e-11 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01102 - - gmx:100786643 1263.06