Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01089 ATGGAGATGGAGATGAGATGTACTGAAGACATAGACATAGGAACGAACATAACCCCAAAACTCACCCCTCTCTCTTTCTCTCTCCACAATCCTCATCTCCACACTCATTGCTCAGCATGTTTCTCTCCCATTCCCATTCCCAATCCCAATTCCAATTCCCATTCCCTCTTCTACTGCTCCCCTTCCTGCTCCGCCGCCCATTCCCCCCTCTGCCACTCCTCCGCTGAGCTCCACCTCCCTCCCTCTGCCGACTCCTCCCTCCTCCGCTCCGCCCTCCGCCTCCTCCGCTCCCACCGCCCCGACTCCTCCTCTGGTCGGGTCGCCGGGCTTCTCTCCAACCTTCACAAGCTGACGTGTCCAAATCATGATGACGTGGAGCTCTCCGATACCATCAGAGTCGGCGCCAGTGCAATGGCCACAGCGTTAGCGAAACAACACGGCGTCATTGAACCGAACGAATACGACGCCGTTTTGGAGGACGCTGCTTCTGCTCTATGCGCTGTGCTAACGAACGCCGTGGAGGTGCACGATAACGAAGGACGCACCCTCGGAATCGCGGTTTTCGTAACCACCTTCTCTTGGATCAACCATAGTTGTTCCCCGAATGCGTGCTATCGCTTCACCTTCTCTTCTTCGCTTTCTTCTTCGGAAGCGAAACTTCGCATAGCTCCATTCACTCGTCATTCTCCACAACCACAAGTAGATGGTGGGGTTTGTTGTGGTAGCAGTAGTGAATGTGAAAAAGAAGGGGGGCTGGGTTATGGTCCAAGATTGATTGTGAGGAGTATCAAGAGAATAATGAAGGGAGAAGAGGTCACAGTAGCTTATACTGATCTCTTGCAACCTAAGGGAATCAGACAATTGGAGCTGCGGTCAAAATATAGGTTTATTTGTTGTTGCAAACGATGTAATGCTCTGCCCTTCACATACGTGGATCATGCATTACAAGAAATTTCTGTTTCCAGTTGTGATTCATCTGGTTTTTGTTCCAATTACAAGTTCTTCAGAGACATGGTTGATAGAAGATTGACTGAGTGCATTGACGATGTTATATCAGAGTACCTTTCTGTTGGTGATCCTGAGTCTTCTTGTAAGAAGCTTGAGAAGATACTTGTGCAAGGTTTAAATGAGCAGTTAGAAGGCATTGAAGGAAAATCACATTCTAAATTCATGCTGCATCCCCTACATCACCTCTCCCTAAATGCCTATATGACACTCGCTTCAGCATATAAAGTTCGTGCTAGTGATTTATTATCTGTAGATTCTGAAAGAGATCTAAACCAGTTAGAAGCTTTTGAGATGAGCAGAACCAGTGCTGCATATTGTTTGTTACTTGCAGGTGCAACTCATCATCTCTTCAATTCTGAATCCTCATTGATTGCATCCGTTGCAAATTTTTGGGCAGGTGCTGGCGAATCTCTTTTATCTCTTACCAGAAGTACAGGATGGAGTAAGTTTGTTAAATCAGCTCTGGTTTTTCCAAACCATTCTTCTGTCACGAAGTTAAAATGCTCCAAGTGTTCATTAATGGATAGATTTGGAGCCTGTATATCAAATGGTCAAATTAAAAGTGCAGATTTTGAGAATGTATCGAATGAGTTTCTTCATTGTATCTCAGATATTACACAGAGAGTTTGGTGCTTCCTTGTCTATGGTTGCCATTTTTTGAGATCATGTGAAGATCCTATCAATTTCAGCTGGATAATGTCGACCAAAAAGTTCAGTACGGTGGATTCTGGGGCTCATGTTAATAAAACTGACATGTGTTACCCCCATGAATCCGAGAATAGCCTCCATATCTGTGAAGAAAAAGCTTACACTGATCATACAGTAGCAGACATTTTTCAGCTCGGTGTTCACTGCTTAGCATATGGAGGATTATTGGCTAGTATATGTTATGGTCCTCATTCCCATTTGGCTTGTCATATTCAAAATATTCTAGATTGTGAAAAGAATGTTGAATTACATTTTAATGAAGAATTTTGA 1986 0.4441 MEMEMRCTEDIDIGTNITPKLTPLSFSLHNPHLHTHCSACFSPIPIPNPNSNSHSLFYCSPSCSAAHSPLCHSSAELHLPPSADSSLLRSALRLLRSHRPDSSSGRVAGLLSNLHKLTCPNHDDVELSDTIRVGASAMATALAKQHGVIEPNEYDAVLEDAASALCAVLTNAVEVHDNEGRTLGIAVFVTTFSWINHSCSPNACYRFTFSSSLSSSEAKLRIAPFTRHSPQPQVDGGVCCGSSSECEKEGGLGYGPRLIVRSIKRIMKGEEVTVAYTDLLQPKGIRQLELRSKYRFICCCKRCNALPFTYVDHALQEISVSSCDSSGFCSNYKFFRDMVDRRLTECIDDVISEYLSVGDPESSCKKLEKILVQGLNEQLEGIEGKSHSKFMLHPLHHLSLNAYMTLASAYKVRASDLLSVDSERDLNQLEAFEMSRTSAAYCLLLAGATHHLFNSESSLIASVANFWAGAGESLLSLTRSTGWSKFVKSALVFPNHSSVTKLKCSKCSLMDRFGACISNGQIKSADFENVSNEFLHCISDITQRVWCFLVYGCHFLRSCEDPINFSWIMSTKKFSTVDSGAHVNKTDMCYPHESENSLHICEEKAYTDHTVADIFQLGVHCLAYGGLLASICYGPHSHLACHIQNILDCEKNVELHFNEEF* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01089 661 Gene3D SET domain 255 303 IPR046341 -
Rops5g01089 661 Gene3D SET domain 7 208 IPR046341 -
Rops5g01089 661 SUPERFAMILY SET domain 171 304 IPR046341 -
Rops5g01089 661 CDD SET_SMYD 165 303 - -
Rops5g01089 661 Pfam SET domain 5 276 IPR001214 GO:0005515
Rops5g01089 661 Gene3D - 79 172 - -
Rops5g01089 661 Gene3D - 36 78 - -
Rops5g01089 661 PANTHER PROTEIN SET DOMAIN GROUP 41 3 653 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Rops5g01089 SET 5.8e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01089 - - aprc:113867790 929.087