Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01084 ATGGAAGGGAATTTGTCACAGGGAGGTATAATTCAAGGTGGAGGTTCTTTTTGTGGTTTTGATTTGCCTGGATCAATGAGGGTTCATCGTCAAGCTCAGCATCCACATACCATGAACCAACATCAAACTCATCCTTGCCAAGGGTCTTCAGTGCATTCTTCAATTCATGATGGTTTTCCTCTTACAATGGGAACCATGCAGAATTGTGATCAGACTATGTCAATGACAGAGTTTAGTCAAGGAGATAAAAACAGAAACTCAGCAAGTGAAGAAGATGAGCCAAGTTTTGCTGAGGAAGGTGTTGACGGTCATCAAGAAGCGGGTAGAGGGAAAAAGGGGTCACCTTGGCAAAGGGTGAAGTGGACCGATAAGATGGTGAGGCTTCTGATAACAGCTGTGTCCTATATAGGCGAGGACATGACTTCTGATGGTGGTGGTGGAAGAAGGAAATTTGCAGTCCTGCAGAAAAAGGGTAAGTGGAAATCTGTTTCCAAGGTCATGGCTGAAAGAGGTCATCATGTTTCACCTCAGCAGTGTGAGGATAAATTCAATGATCTTAATAAAAGGTACAAAAGGCTTAATGATATGCTTGGGAGGGGCACTTCTTGTCAGGTTGTTGAAAATCCTGCTCTGTTGGATGTGATAGATTATCTTTCTGAGAAAGAAAAGGATGATGTTCGAAAAATCTTAAGCTCTAAACACCTCTTCTATGAAGAGATGTGTTCTTACCATAATGGTAATAGATTGCATTTGCCCCATGATCCTGCATTGCAACGTTCGCTGCAGTTAGCTTTCCGAAATAGAGATGATCATGATAATGATGATATCAGAAGGTCCTATCATGATGATCATGATGAAGATGATCAAGATGCGGAAAGCGATGACCATGATGACTTTGAAGAGAATTATGCTTCCCATGGAGATAGTAGGGGAATGTATGGGGGATTGGGGGGATCTGTGAAAAGACTAAAACAAGGGCAAGGTCAAGAAGATGCTAGTTTCGGGAATTCTTTAAATAGTCAGGACTACAACAAAAGTTCCTATCCTCCTCATGGACAGATGGTCCACTCTGATGCGAATCAAGCTTTACCTGAAAACGTGAAAGCTGCTTGGTTACAGAAGCAATGGGTTGAATCTCGGTCACTTCAGTTAGAAGAGCAAAAGCTACAGATTCAGGTTGAGATGCTGGAACTAGAGAAACAGAGATTCAAGTGGCAGAAGTTTAGTAAGAAAAAAGACCGGGAGTTGGAAAAGTTGAAGCTGGAGAATGAAAGAATGAAGCTTGAAAATGAACGTATTGCTTTAGAACTAAAGCGAAAGGAAATGGGCATTGGCTTTAACTAG 1344 0.4174 MEGNLSQGGIIQGGGSFCGFDLPGSMRVHRQAQHPHTMNQHQTHPCQGSSVHSSIHDGFPLTMGTMQNCDQTMSMTEFSQGDKNRNSASEEDEPSFAEEGVDGHQEAGRGKKGSPWQRVKWTDKMVRLLITAVSYIGEDMTSDGGGGRRKFAVLQKKGKWKSVSKVMAERGHHVSPQQCEDKFNDLNKRYKRLNDMLGRGTSCQVVENPALLDVIDYLSEKEKDDVRKILSSKHLFYEEMCSYHNGNRLHLPHDPALQRSLQLAFRNRDDHDNDDIRRSYHDDHDEDDQDAESDDHDDFEENYASHGDSRGMYGGLGGSVKRLKQGQGQEDASFGNSLNSQDYNKSSYPPHGQMVHSDANQALPENVKAAWLQKQWVESRSLQLEEQKLQIQVEMLELEKQRFKWQKFSKKKDRELEKLKLENERMKLENERIALELKRKEMGIGFN* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01084 447 MobiDBLite consensus disorder prediction 268 352 - -
Rops5g01084 447 MobiDBLite consensus disorder prediction 30 116 - -
Rops5g01084 447 MobiDBLite consensus disorder prediction 84 116 - -
Rops5g01084 447 Pfam Myb/SANT-like DNA-binding domain 118 243 IPR044822 -
Rops5g01084 447 Coils Coil 409 441 - -
Rops5g01084 447 Coils Coil 379 401 - -
Rops5g01084 447 Gene3D - 121 192 - -
Rops5g01084 447 PANTHER F16F4.11 PROTEIN-RELATED 1 444 - -
Rops5g01084 447 MobiDBLite consensus disorder prediction 32 83 - -
Rops5g01084 447 MobiDBLite consensus disorder prediction 268 285 - -
Rops5g01084 447 MobiDBLite consensus disorder prediction 329 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01084 Rops-Chr5 22336543 22338684 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Rops5g01084 Myb_DNA-bind_4 1.2e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01084 - - gmx:100812134 723.776