Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01080 ATGAAGAGTCTTCTAGGCTGTATGGTGATTGTGGAAAAATATAAACCTTATGTTGCAATGCTCTTCATTCAGTTTGTGTATTCAGGAATGGCTTTGTTGTCTAAGGCAGCAATTTCCAAGGGAATGAGCCCTTATGTGTTTGTTGTTTATAGACAAACATTTGCATCACTTGCCTTATCTCCATTTGCTTTCTATGACAGGAAGCATGCTGCTCCTTTGTCAAGCAACTTATTGTGCAAATTGTTTCTAGTTTCCCTTGTTGGGTTAACAGCAAGTTCAAACCTTTACTATGTTGCTATCAACTATACCTCTGCAACCTTTGCTGCAGCCAGCACAAACACAGTCCCTTGCATTACTTTTATCATGGCTGCATTAATTAGGGTGGAAAGCATTTCCATAAAACATCTACATGGGCAGGCCAAGATTTTGGGTTCTGTTCTCAGCCTTTCTGGGGCAATAACATTTGCTTTAGTCAAAGGGCCTCCTCTACATTTTATGAAGTGGTATCCAGAGAATCAGAAGCATAATTCTCACCCATTAACAACAGTTCATTCCAAAGGGGATTCTATTAAAGGCTCTCTTATGATGCTGTCAGCAAACACTACTTGGTCCTTGTGGCTTATTTTACAGGGATTCATTGTGAAGCAATACCCAGCAAAATTTCGCCTCACTATTCTACAATGCTTTTTTAGCTTCATACAATCAGCTATTTTGGCAGTTGCAGTTGAGAGGAATCCTTCTGCATGGAAGCTTGGATGGGATATTCATCTTCTTTCAGTGGCTTATTGTGGTGTAATTGTAACAGGCATTTGTTATTGGCTGCAAGTCTGCACTATAGAGAGGAAAGGTCCGGTTTTCACAGCAATGTTCACCCCTCTAGCTCTAATAATCACAGCAATATTCTCAGCACTTTGTTGGAAAGAAACACTTCACTGGGGAAGTGTTGGTGGCGCTATTTTGCTGGTGGTTGGACTCTACATCGTCTTGTGGGGGAAGAACAAGGAGAGTGTAAAAGTGGTAAACCGTGAAGATGGAGAAACAAAAGCGGAAACCAGATTGGAGTGCATTATACAGAACTGA 1080 0.4093 MKSLLGCMVIVEKYKPYVAMLFIQFVYSGMALLSKAAISKGMSPYVFVVYRQTFASLALSPFAFYDRKHAAPLSSNLLCKLFLVSLVGLTASSNLYYVAINYTSATFAAASTNTVPCITFIMAALIRVESISIKHLHGQAKILGSVLSLSGAITFALVKGPPLHFMKWYPENQKHNSHPLTTVHSKGDSIKGSLMMLSANTTWSLWLILQGFIVKQYPAKFRLTILQCFFSFIQSAILAVAVERNPSAWKLGWDIHLLSVAYCGVIVTGICYWLQVCTIERKGPVFTAMFTPLALIITAIFSALCWKETLHWGSVGGAILLVVGLYIVLWGKNKESVKVVNREDGETKAETRLECIIQN* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01080 359 PANTHER WAT1-RELATED PROTEIN 15 341 IPR030184 GO:0016020|GO:0022857
Rops5g01080 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 149 - -
Rops5g01080 359 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020
Rops5g01080 359 Pfam EamA-like transporter family 17 149 IPR000620 GO:0016020
Rops5g01080 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01080 Rops-Chr5 22120980 22125129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01080 1 355 Nodulin-like Gene Family AT5G07050 35.714 5.10e-81 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01080 - - lja:Lj0g3v0009669.1 595.119