Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01032 ATGGATAAACGGTTTTGGCATGCTTCCAGTAAATTCTTTGCCAATATTGCAAATACAGATGTGTCTGATCTTTTTTGGAACCCTTTTCTTCAAAACCATCTTATGTCGTCTAGGATTCCCCAGATTCACTTCTATGAGCATTATATGAGTGTGGTCCACAGAACTAGAAGGAGTGCCACCAACATTGGTTCTATAGCCATAATGGCTCCCTTTCTATGTGGCATGGCTGTTGTGGGTTTTCACTCATCAAAACACCTAAATCCAGGTGAGGCAACAAAACTCGGAGTTATCACCATTTTGTGCTCTGTAACTCCTTTTCCTGTCATTTCTTCAGTTTTAAGCGATCTTAAGATCTTGAATTCGGAACTAGGAAGATTAGGCCAGTCCTCAGCACTAGTCAGTGAGATGTTTAATATATTCTTGACATCAACCTCGATGTTCACTAAATTAATGGTCCAATCTGGTTTCACAAGAGCTTTCATTTGCTTGGCAGCTGCAATTTTGTTTGTATTGTTGGTTATGTTCATCATACGCCCAGCCATGTTTTGGATCATAAAACAGACACCAGAGGGTTCCCCTGTTAGTGATCATTATGTCTATTGTGTACTTATAATGGCTCTTTTAGCATCTTATGCCACACACCGTTTTGGGTTCTTTGCTATCTTTGGACCTTTTGTTTTGGGTTTGGCTATTCCAGAAGGACCTCCATTAGGTGCTGCTATCATTAAGAAGATTGATACTTTTGCTAATGGGGTTTTGATGCCTATTTTTGTGACTACATGTGCCATGAGGGTAGATCTCAAAGATTTCGTGAATTGGAAGGACAAAAATAATGGAAAAGTCGATGATTTCATGGTGCAAACCATGCTTATTGTTGTGGTAACTTTTGTTGTCAAATTTGTTGCCTGCATGGTACCTCCTTTATACAGTGAGATGCCCTTGACTGATGCTGTATCTCTCTCTTTGATTATGAGTAGCAAAGGGATAGTTGAAATGGCTGCATGCTCCTTAATCAGAGATGTCATAGGTATACCAAATAATGCCTTCGCTTTATTGATGATGTGCATCATAATGAATGCCACAGTTATACCAATGCTCTTGGGTTATCTCTACGACCCAATGAAGAAATACGCAGGTTACACAAAGAGGAACATCACTGATCTCAAAAGCAACATGGAACTTCGAGTTCTAACATGCATTCACAGATCTGACAACATTCCCCCAACAATAAACCTTTTAGAAGCAACATACCCTACAAAAGAAGAACCCCTCTCAGTTTACGTTCTCCAACTCATAGAACTAATAGGAAGAGCATCACCAGTTTTCATCTGCCACCAATTGCAGAAGAAGAAGAATTCCAATAACAGCTCCATGGCAGAGAAACTCCTCGATGCTTTTCTGAATTTTGAGAGAGAGTTCAAGGGTGTTTTGATTGTGAACACTTTCACAACTATCTCACCAGCTGAGATGATGTATGATGACATTTGCACTATGGCACTTAACAAGTTCACATCACTTATAGTCCTTCCTTTTCATAGAAAATGGTCTTCAGATGGGAACTCAATTGAGTTAGAAGATGAGTCATTAAGAGACTTGAACTATCGTGTTATGGAAAGAGCTCCTTGTTCAGTTGGGGTGCTAATTGAGAAGGTACAAATGACACATATTTTCTCACCAGAGACACCTTACAATGTTTGTTTGCTTTTCACAGGAGGGAAAGATGATAGAGAGGCACTTTTCTTTGCTAAGAGAATGACGAAGAACCCACATGTTAGACTCACTGTGATTAGGTTCTTATCTTCGAATAGTGACTCAAAAGAATGGGAAACATTGCTTGACACTGAGATACTTGATGATATTAAGATGAAAAAGAAGGCCAATGTGAAATACACAGAGAAGATTGTGAAAGATGGAGCTGAGACAGCTTTGGTTATTCGTTCTTCAGTGAGTGAGTGTGATTTGATTATTGTTGGGAGACAAGCAGGGATTGAAACTCCTCAAACTTTGGGGCTTTTGCAATGGAGTGAGTATCCAGAACTTGGGGTGTTAGGGGATTTGTTAGCCTCCACTGATGCAGCTGGCAAAGCTTCTGTCTTCAAATCAGAAGAGAAAAACCACACTACATTTGCTCCAAACCTTAGTCAGATCAAGGCACCCACCTCCTCCGCCGCTGTCACCCTCGCCGGGTTTTTGGTTTTCTGTGAGTATCAATCTGTTCTACATCCCTGTTGGTCAAGAATGCAATTCTTTGGGGGGTCTGAGATCAGTCCGTCACCGCCTGTGCCGACAGCTTCAGGAAATAATGGACATATGTTGTATGTGTTCAATAGGAATGGTGTATGCTTGCTCTATAGGGAGTGGAATCGCCCCCTGAGGACATTGAATGCCCAGCAAGATCATAAGTTGATGTTTGGTCTGCTTTTCTCACTTAAGTCATTAACTGCCAAGTTGGACCCTACTAGTGCTGAGAAAGGAAACCTTGGGGTGCCTCAGTTACCTGGCCAGGGTTGTTCATTTCACAGTTTTCGCACAAATACATACAAACTTAGTTTCATGGAAAGTCCTTCAGGAATAAAGATTATCTTGGTGACTCATCCTAGAACTGGTGACCTACGGGAGTCATTAAAGTATATCTACAATTTGTATGTTGAGTATGTTGTCAAGAATCCACTCTATACACCCGGATCTCCTATCAGGTGTGAGCTGTTCAATACAACATTGGACCAGTATGTAAGAGGCATTGCATAG 2748 0.409 MDKRFWHASSKFFANIANTDVSDLFWNPFLQNHLMSSRIPQIHFYEHYMSVVHRTRRSATNIGSIAIMAPFLCGMAVVGFHSSKHLNPGEATKLGVITILCSVTPFPVISSVLSDLKILNSELGRLGQSSALVSEMFNIFLTSTSMFTKLMVQSGFTRAFICLAAAILFVLLVMFIIRPAMFWIIKQTPEGSPVSDHYVYCVLIMALLASYATHRFGFFAIFGPFVLGLAIPEGPPLGAAIIKKIDTFANGVLMPIFVTTCAMRVDLKDFVNWKDKNNGKVDDFMVQTMLIVVVTFVVKFVACMVPPLYSEMPLTDAVSLSLIMSSKGIVEMAACSLIRDVIGIPNNAFALLMMCIIMNATVIPMLLGYLYDPMKKYAGYTKRNITDLKSNMELRVLTCIHRSDNIPPTINLLEATYPTKEEPLSVYVLQLIELIGRASPVFICHQLQKKKNSNNSSMAEKLLDAFLNFEREFKGVLIVNTFTTISPAEMMYDDICTMALNKFTSLIVLPFHRKWSSDGNSIELEDESLRDLNYRVMERAPCSVGVLIEKVQMTHIFSPETPYNVCLLFTGGKDDREALFFAKRMTKNPHVRLTVIRFLSSNSDSKEWETLLDTEILDDIKMKKKANVKYTEKIVKDGAETALVIRSSVSECDLIIVGRQAGIETPQTLGLLQWSEYPELGVLGDLLASTDAAGKASVFKSEEKNHTTFAPNLSQIKAPTSSAAVTLAGFLVFCEYQSVLHPCWSRMQFFGGSEISPSPPVPTASGNNGHMLYVFNRNGVCLLYREWNRPLRTLNAQQDHKLMFGLLFSLKSLTAKLDPTSAEKGNLGVPQLPGQGCSFHSFRTNTYKLSFMESPSGIKIILVTHPRTGDLRESLKYIYNLYVEYVVKNPLYTPGSPIRCELFNTTLDQYVRGIA* 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01032 915 Pfam Sodium/hydrogen exchanger family 48 363 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Rops5g01032 915 CDD TRAPPC1_MUM2 770 910 - -
Rops5g01032 915 Gene3D - 45 378 IPR038770 -
Rops5g01032 915 SMART Sybindin_2 769 914 IPR007233 GO:0016192|GO:0030008
Rops5g01032 915 Gene3D - 770 915 - -
Rops5g01032 915 PANTHER CATION/H + ANTIPORTER 50 698 - -
Rops5g01032 915 SUPERFAMILY SNARE-like 770 913 IPR011012 -
Rops5g01032 915 Gene3D - 389 675 - -
Rops5g01032 915 FunFam Trafficking particle complex subunit 1 768 915 - -
Rops5g01032 915 Pfam Sybindin-like family 770 912 IPR007233 GO:0016192|GO:0030008
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01032 Rops-Chr5 20948810 20974905 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01032 51 705 Antiporter Super Family AT5G22900 38.793 4.22e-160 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01032 K26731 - gmx:100785558 985.711