Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops5g01025 | ATGGAACAGAAGCACGTTTTTTTGTCAGCATTAAGTGTTGGAGTTGGGTTGGGTGTGGGGCTTGGATTGAGTTCAGGACAGAAATGGGTTGGAGGGAATCGTGACTCTGATGAGGTTTCTGGTGAGCAAATTGTGGAAGAGCTCAAGAGATTGATGATTGATGGAAAGGATATCAAAGTTACATTTGATGACTTTCCTTATTACTTAAGTGAAAGAACTCGAGTTTTGTTGACAAGTGCTGCATATGTTCATTTAAAACATCTTGACTTTTCCAAGCACACCAGGAACCTCTCACCAGCAAGCAGGGCTATTTTGCTCTGTGGTCCAGCAGAACTTTACCAGCAAATGCTTGCCAAAGCTTTAGCACATTCCTTTGAATCAAAGTTGCTATTGTTAGATATTACTGACTTCTCTGTGAAGTTGCAGAGCAGATTTGGATGTTCCAGAAAAGAACCTTCTTTTAAAAGGTCAATATCCGAGATGACATTGGAGCGAATGTCTGGTTTGTTTGGTTCCTTTTCAATGCTGCCTTCAACAGGCGAAACTAAAGGAACTCTGCGTCGACAAAGCAGTGCTGTTGAAAGTTTCAATAATCCTCCAAAGCTTCGGAGGAATGCCTCTGCTGCGTCTGATATAAGTAGCACTGCTTCACAGAGTGGTCCAACAAATCCAGCTCCTTTAAGGCGCACAAGTAGCTTGTGTTTTGATGAAAAGCTCTTCGTGCAGTCACTATACAAGGTTTTGGTTTCAATATCAGAAACCAGTTCCATCATTTTATACATCAGGGATGTTGAGAAGCTTGTTCTCCAATCACCAAGGTTATATAATTTATTACAAAAAATGATAAAGAAACTGTCAGGCTCGGTGTTGATACTCGGTTCGCAGATATTAGATTCAGAAGATGATAGCAAAGAAGTTGATGAAAGGCTCACTGTGTTATTCCCCTACAACATTGAGATCAAACCTCCTGAAGATGAAACTCATCTTGGGAGCTGGAAAGGCCAACTGGAAAAGGACATGAAAATGATTCAGTTTCAAGATAACAGAAACCACATTGCTGAAGTACTTGCAGCAAATGACATTGATTGTGAAGACTTATCTTCAATCTGCCATGCAGATACTATGATACTCAGTAATTATATTGAAGAAATCGTGGTATCTGCAATATCTTACCATTTAATGAATACCAAGGATCCGGAATACCGAAATGGAAAGCTAGTTATATCAGCCAATAGTTTGTCCCATGGATTGAGTCTGTTCCAGGAAGGCAAGAGTAGTGGGAATCTGAAGACTAACGAATCTAACAAGGAAAATGCTGGAGAAGATATTATTGGTGCAAAGAATGATGTTAGGTGTGACAACCAAGCACCTGACAACAAAAGTGAGACAGAGAAATCCATCCCTGTAACAAAGAAAGATGGGGAAACTCCTACACCTGCAAAAGCAGAAGTTCCTGACAACGAGTTTGAGAAGCGTATAAGACCAGAGGTCATCCCTGCAAATGAGATAGGGGTTACATTTGCAGATATTGGTGCATTGGATGAGATCAAAGAATCACTTCAAGAGTTGGTAATGCTTCCCCTTAGAAGACCAGACCTCTTCAAAGGTGGGCTTCTAAAGCCTTGTAGAGGTATATTGCTTTTTGGGCCTCCTGGTACTGGAAAAACAATGCTAGCAAAGGCAATTGCAAATGATGCTGGAGCAAGTTTCATTAATGTTTCAATGTCCACTATCACTTCAAAATGGTTTGGAGAAGATGAAAAGAATGTCCGAGCTCTATTCACATTAGCAGCTAAGGTTGCCCCGACTATTATCTTTGTTGATGAGGTTGACAGCATGCTTGGGCAGCGGACTAGAGTTGGAGAGCATGAGGCTATGAGGAAGATTAAAAATGAATTCATGACTCATTGGGATGGGCTATTAACATCACCTGGTGAGCAGATTCTGGTTCTTGCTGCAACCAACAGGCCATTTGACCTTGATGAAGCAATTATAAGACGGTTTGAGCGCAGGATCATGGTGGGTCTCCCATCTGCTGAGAATAGGGAAATGATCCTGAAAACTCTCCTAGCTAAGGAAAAGCACGAAAACTTGGACTTCAAAGAGCTGGCAACAATGACAGAAGGATATACTGGAAGTGATCTTAAGAATTTGTGCATCACTGCGGCTTATCGACCTGTTAGGGAGCTAATACAGCAAGAAAGACAAAGAATGAAGGAAATGGAAAAGAAGAAAAGAGAGGCAGAAGGCCAAAGCTCCGAAGATGCTTCAAATAATAAAGAAGACCAAGAAATTACCCTGAGGCCTTTGAACATGGAAGACATGAGACAGGCTAAGAGTCAGGTGGCTGCAAGTTTTGCGTCAGAAGGATCAGTAATGGCTGAGCTGAAACAATGGAACGATTTGTATGGAGAAGGAGGTTCAAGGAAGAAACAACAGCTCACTTACTTCCTTTAG | 2457 | 0.4143 | MEQKHVFLSALSVGVGLGVGLGLSSGQKWVGGNRDSDEVSGEQIVEELKRLMIDGKDIKVTFDDFPYYLSERTRVLLTSAAYVHLKHLDFSKHTRNLSPASRAILLCGPAELYQQMLAKALAHSFESKLLLLDITDFSVKLQSRFGCSRKEPSFKRSISEMTLERMSGLFGSFSMLPSTGETKGTLRRQSSAVESFNNPPKLRRNASAASDISSTASQSGPTNPAPLRRTSSLCFDEKLFVQSLYKVLVSISETSSIILYIRDVEKLVLQSPRLYNLLQKMIKKLSGSVLILGSQILDSEDDSKEVDERLTVLFPYNIEIKPPEDETHLGSWKGQLEKDMKMIQFQDNRNHIAEVLAANDIDCEDLSSICHADTMILSNYIEEIVVSAISYHLMNTKDPEYRNGKLVISANSLSHGLSLFQEGKSSGNLKTNESNKENAGEDIIGAKNDVRCDNQAPDNKSETEKSIPVTKKDGETPTPAKAEVPDNEFEKRIRPEVIPANEIGVTFADIGALDEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANDAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLTSPGEQILVLAATNRPFDLDEAIIRRFERRIMVGLPSAENREMILKTLLAKEKHENLDFKELATMTEGYTGSDLKNLCITAAYRPVRELIQQERQRMKEMEKKKREAEGQSSEDASNNKEDQEITLRPLNMEDMRQAKSQVAASFASEGSVMAELKQWNDLYGEGGSRKKQQLTYFL* | 819 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops5g01025 | 818 | Coils | Coil | 727 | 751 | - | - | |
Rops5g01025 | 818 | MobiDBLite | consensus disorder prediction | 736 | 764 | - | - | |
Rops5g01025 | 818 | MobiDBLite | consensus disorder prediction | 435 | 488 | - | - | |
Rops5g01025 | 818 | ProSitePatterns | AAA-protein family signature. | 648 | 667 | IPR003960 | GO:0005524|GO:0016887 | |
Rops5g01025 | 818 | PANTHER | AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED | 44 | 817 | - | - | |
Rops5g01025 | 818 | FunFam | p-loop nucleoside triphosphate hydrolase superfamily protein | 504 | 679 | - | - | |
Rops5g01025 | 818 | Gene3D | - | 677 | 749 | - | - | |
Rops5g01025 | 818 | Pfam | ATPase family associated with various cellular activities (AAA) | 545 | 675 | IPR003959 | GO:0005524|GO:0016887 | |
Rops5g01025 | 818 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 504 | 732 | IPR027417 | - | |
Rops5g01025 | 818 | MobiDBLite | consensus disorder prediction | 423 | 488 | - | - | |
Rops5g01025 | 818 | Pfam | AAA+ lid domain | 697 | 742 | IPR041569 | - | |
Rops5g01025 | 818 | Gene3D | - | 504 | 676 | IPR027417 | - | |
Rops5g01025 | 818 | SMART | AAA_5 | 541 | 678 | IPR003593 | GO:0016887 | |
Rops5g01025 | 818 | MobiDBLite | consensus disorder prediction | 180 | 226 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops5g01025 | Rops-Chr5 | 20767824 | 20775827 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops5g01025 | 505 | 742 | Calmodulin-binding Proteins | AT3G56690 | 38.843 | 1.81e-43 | 168 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops5g01025 | - | - | gmx:100804099 | 1420.22 |