Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01016 ATGGTCCAGTATTTGAGAGCAATGCCATTTGCTCGTTATGTTGCTCGATTGAAGGATGACAACACTTTGTATGGATCTTCTTCTATCGAATATGCCACACACTTTAGAGGGGTTGTTGTTTCGTCCAAAACGCATGCATGCTCCCACGTCCTCCACGTCACCCACGAGCATCCAGTCTCCATCATTGGCAAAGGGGGTGGATACAATGGAACATCTTACATGTTTGGGAGCATATCACCAGTTATAAAGAGCAACATGGGTTACAACCAGAAGGAGGTGGCTTTCTTGAGTGTGGCCAAGGATTTGGGTGATAACGTTGGGCTTCTAGCTGGGAAAATCAGCATTGATTTGCAGTTATGCCTTCTTATCCTTGTGGGACAAAATGGATCAACATATTACAACACAGCTGCTCTCGTTTCTTGTGTACAAAATTTTCCAGAGAGCAGAGGACCCGTGGTGGGGATATTGAAGGGCTTTGTTGGCTTAAGTGGTGCTATTTGGACTCAAATAATAGCTATGATCAATATTCCTGATCAAGCATCTTTAATTTTCGTCATAGCAGTTGGACCTGCAAGGGTTTCTTTCACTCTCATGTTCATCATGAGACCAGTTGAAAGTTACAAACAATCCAGAGCCTCTGATGGTTCCGGCTTCATGTTTATCTACAGCATTTGTCTTCTCTTGGCTGCATATTTGATGGGAGTTTTGTTGCTAGAGAATATGTTGGATTTGGACCAAAGCACCATCACATTATTTGCAGTTATTTTGATCATTCTCATATTGCTTCCCATTATAGTTCCTATTCTATTGGTTTACTTCTCGGACCCCAAGAGTCCTGACGAGGAAACACTTCCCAACCACCTGCTGGAGCACCAACACCATGCATCAACCGTGCAGTCCTTGAAGCTTCACGTAGGATGGACCAACTGCAAGGGTCCTTTGTTTTCCTTCATGGTGCAGCCCCTCCACCATGGGCACCCCAGCCACCATAAGTGA 996 0.4458 MVQYLRAMPFARYVARLKDDNTLYGSSSIEYATHFRGVVVSSKTHACSHVLHVTHEHPVSIIGKGGGYNGTSYMFGSISPVIKSNMGYNQKEVAFLSVAKDLGDNVGLLAGKISIDLQLCLLILVGQNGSTYYNTAALVSCVQNFPESRGPVVGILKGFVGLSGAIWTQIIAMINIPDQASLIFVIAVGPARVSFTLMFIMRPVESYKQSRASDGSGFMFIYSICLLLAAYLMGVLLLENMLDLDQSTITLFAVILIILILLPIIVPILLVYFSDPKSPDEETLPNHLLEHQHHASTVQSLKLHVGWTNCKGPLFSFMVQPLHHGHPSHHK* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01016 331 Pfam Nodulin-like 69 114 IPR010658 -
Rops5g01016 331 Pfam Nodulin-like 118 268 IPR010658 -
Rops5g01016 331 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 68 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01016 Rops-Chr5 20440339 20441715 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01016 70 300 Nodulin-like Gene Family AT3G01930 48.302 4.51e-69 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01016 - - gmx:100784744 326.25