Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00994 ATGAAAGCTACCATCCAAAATGTAATGTCTGCAAGCACTTTAGTAACATGTGACATGGATGAAGAGAACGGAAAAATGCTATTCAGACTACAACCTCATGGGAGCTATATCTTATATGAGAGGCACATCCATTCTGGATCCAGAAATATTGCCTTTCTAATGAACATGATAATACTCCTCGTTGTTGCAGCATGTGAGCAAATGGAGGGCCATTATCACATGCTTGAAACCAGAGGACTCTGCCTCTCAAAGAAACTCAACACTATAATTGAGCACAATGATGTGAATGTTTATGAGTGTAAGAGAACTAACTTTTTAGAACTAATAACCGGACGTCCACCAATCACTACAGCAGGGTCAAGGAATGAGAGCCTCGTTGACTGGGCTAGGCCCTTGCTTGCTCAAGCGCTACAAGATGGTAACTTCAACAATCTTGTTGATCCTAGGTTGCAGAAAAATTATGATGCTGATGAGATGGCTAGAATGATTACCTGTGCTGCTGCTTGCGTGCGCCATTCAGCAAGGCTTTGA 531 0.4218 MKATIQNVMSASTLVTCDMDEENGKMLFRLQPHGSYILYERHIHSGSRNIAFLMNMIILLVVAACEQMEGHYHMLETRGLCLSKKLNTIIEHNDVNVYECKRTNFLELITGRPPITTAGSRNESLVDWARPLLAQALQDGNFNNLVDPRLQKNYDADEMARMITCAAACVRHSARL* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00994 176 Gene3D Transferase(Phosphotransferase) domain 1 104 176 - -
Rops5g00994 176 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 105 175 IPR047117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00994 Rops-Chr5 19764406 19766693 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00994 105 174 Trihelix Transcription Factor Family AT5G38560 60.563 4.41e-22 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00994 - - gmx:100810262 135.191